RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TMBIM6P55061 237 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 TMPRSS3P57727 454 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 NCS1P62166 190 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 RPS25P62851 125 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 ACTC1P68032 377 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 ACTA1P68133 377 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 ACSM1Q08AH1 577 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 TPBGQ13641 420 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 SPCS2Q15005 226 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 PCK2Q16822 640 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 TP53I3Q53FA7 332 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 C10orf128Q5T292 105 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 RPTNQ6XPR3 784 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 LRRC69Q6ZNQ3 347 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 FOXL2NBQ6ZUU3 175 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 DPY19L4Q7Z388 723 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 P2RY8Q86VZ1 359 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 KLBQ86Z14 1044 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 C20orf196Q8IYI0 205 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 KLHL36Q8N4N3 616 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 MEIOBQ8N635 442 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 NDNFQ8TB73 568 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 NSMAFQ92636 917 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 MCHR2Q969V1 340 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 NABP1Q96AH0 204 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 FAM122AQ96E09 287 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 ZHX1-C8orf76Q96EF9 292 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 ZNF837Q96EG3 531 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 DTNBP1Q96EV8 351 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 PELI1Q96FA3 418 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 C4orf36Q96KX1 117 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 ADAD1Q96M93 576 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 INTS14Q96SY0 518 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 YIPF3Q9GZM5 350 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 PRDM14Q9GZV8 571 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 OR51E2Q9H255 320 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 RNF167Q9H6Y7 350 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 ISYNA1Q9NPH2 558 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 NDUFB11Q9NX14 153 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 ST6GALNAC2Q9UJ37 374 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 KCNG2Q9UJ96 466 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 B3GNT3Q9Y2A9 372 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 CAB39Q9Y376 341 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 GRIP1Q9Y3R0 1128 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 CACNA1CQ13936 2221 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 BOD1L1Q8NFC6 3051 aa6.11□□□□□ -1.43
TOPBP1-203ENST00000503464 CHD8Q9HCK8 2581 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 PNMA8CA0A1B0GUJ8 204 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 A0A1W2PPW3 197 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CCDC160A6NGH7 325 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CENPBD1B2RD01 187 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 PSMD9O00233 223 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CCRL2O00421 344 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 ZNF593O00488 134 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 AQP7O14520 342 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 UPK3AO75631 287 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 QDPRP09417 244 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 FAM87AP0C7U9 286 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 OR8G3PP0DMU2 310 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 LAP3P28838 519 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CDAP32320 146 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CRYBB2P43320 205 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CSNK1A1P48729 337 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 ENTPD1P49961 510 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CLRN1P58418 232 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 NANOS3P60323 173 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 RPS3AP61247 264 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 VBP1P61758 197 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 LSM3P62310 102 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CXADRP78310 365 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 ADAM8P78325 824 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 HSF2Q03933 536 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 GLO1Q04760 184 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 RASGEF1BQ0VAM2 473 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 KCNMB1Q16558 191 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 THEM4Q5T1C6 240 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 LIPKQ5VXJ0 399 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 ZNF324BQ6AW86 544 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 RPUSD3Q6P087 351 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 UNQ6494/PRO21346Q6UXR6 183 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 PLEKHG7Q6ZR37 379 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 VASH1Q7L8A9 365 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 GLB1L2Q8IW92 636 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 SYS1Q8N2H4 156 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 OR10S1Q8NGN2 331 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 OR6N2Q8NGY6 317 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 OTOSQ8NHW6 89 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 RPS4Y2Q8TD47 263 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 ST7LQ8TDW4 575 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 RAB2BQ8WUD1 216 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 C11orf40Q8WZ69 217 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 HSD17B8Q92506 261 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 TMEM45BQ96B21 275 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 PGLYRP3Q96LB9 341 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 CENPOQ9BU64 300 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 LDAHQ9H6V9 325 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 BCO1Q9HAY6 547 aa6.1□□□□□ -1.43
TOPBP1-203ENST00000503464 EMC7Q9NPA0 242 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms