RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 NGBQ9NPG2 151 aa14.39□□□□□ -0.11
SCLT1-205ENST00000503401 PAPOLBQ9NRJ5 636 aaKnown RBP14.39□□□□□ -0.11
SCLT1-205ENST00000503401 OR6C68A6NDL8 312 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 DCTN6O00399 190 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 IDH3BO43837 385 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 BAG2O95816 211 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 CELA3BP08861 270 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 OR8G3PP0DMU2 310 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 SPOCK1Q08629 439 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 SGCAQ16586 387 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 NCMAPQ5T1S8 102 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 MDP1Q86V88 176 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 MYPOPQ86VE0 399 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-205ENST00000503401 NABP1Q96AH0 204 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 GABARAPL1Q9H0R8 117 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 ESRP2Q9H6T0 727 aaKnown RBP14.38□□□□□ -0.11
SCLT1-205ENST00000503401 OBP2BQ9NPH6 170 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 RPRD1BQ9NQG5 326 aaKnown RBP14.38□□□□□ -0.11
SCLT1-205ENST00000503401 PLCE1Q9P212 2302 aa14.38□□□□□ -0.11
SCLT1-205ENST00000503401 GPANK1O95872 356 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 SCG5P05408 212 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 HOXB1P14653 301 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 NPRL3Q12980 569 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 GINS1Q14691 196 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 PGGHGQ32M88 737 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 ZNF362Q5T0B9 420 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 TMEM236Q5W0B7 351 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 ACSM5Q6NUN0 579 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 ADAM5Q6NVV9 412 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 CDC20BQ86Y33 519 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 NPEPL1Q8NDH3 523 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 CIB1Q99828 191 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 SRA1Q9HD15 236 aaKnown RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 KRT84Q9NSB2 600 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 COA3Q9Y2R0 106 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 PDZD2O15018 2839 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 ANKRD17O75179 2603 aaKnown RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 IGHV1-18A0A0C4DH31 117 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 FAM171A2A8MVW0 826 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 ABCD4O14678 606 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 AHCYL1O43865 530 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 MPZL1O95297 269 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 FARS2O95363 451 aaKnown RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 RENP00797 406 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 CD40P25942 277 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 PTDSS1P48651 473 aaKnown RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 IDH3GP51553 393 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 MRPS34P82930 218 aaKnown RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 KDM4DQ6B0I6 523 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 SLC27A4Q6P1M0 643 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 SSX8Q7RTT4 187 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 SLC16A14Q7RTX9 510 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 OR6V1Q8N148 313 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 PQLC1Q8N2U9 271 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 SLC37A3Q8NCC5 494 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 SIAEQ9HAT2 523 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 B3GNT2Q9NY97 397 aa14.37□□□□□ -0.11
SCLT1-205ENST00000503401 TMEFF2Q9UIK5 374 aaPredicted RBP14.37□□□□□ -0.11
SCLT1-205ENST00000503401 KHDRBS3O75525 346 aaKnown RBP14.36□□□□□ -0.11
SCLT1-205ENST00000503401 CD3EP07766 207 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 IGFBP5P24593 272 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 LAP3P28838 519 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 EPHA2P29317 976 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 GIPRP48546 466 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 CENPAP49450 140 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 NR1H2P55055 460 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 CRMP1Q14194 572 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 GSG1Q2KHT4 349 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 UGT2A3Q6UWM9 527 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 TMEM108Q6UXF1 575 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-205ENST00000503401 KBTBD8Q8NFY9 601 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 NEUROG1Q92886 237 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 MS4A3Q96HJ5 214 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 SLC38A2Q96QD8 506 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 DDOQ99489 341 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 LIME1Q9H400 295 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 EMC7Q9NPA0 242 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 B9D1Q9UPM9 204 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 BAIAP2Q9UQB8 552 aa14.36□□□□□ -0.11
SCLT1-205ENST00000503401 EI24O14681 340 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 GOSR1O95249 250 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 IGKV3-15P01624 115 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 CECR9P0C854 216 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 CBR1P16152 277 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 NPR2P20594 1047 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 GUCA1AP43080 201 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-205ENST00000503401 CRISP1P54107 249 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 RAB1AP62820 205 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 PPP2R2BQ00005 443 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 CDK5Q00535 292 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 ZNF704Q6ZNC4 412 aaPredicted RBP14.35□□□□□ -0.11
SCLT1-205ENST00000503401 FOXL2NBQ6ZUU3 175 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 CCDC36Q8IYA8 594 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 PARP8Q8N3A8 854 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 OR9Q1Q8NGQ5 310 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 DNAJC9Q8WXX5 260 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 NANOS1Q8WY41 292 aaKnown RBP14.35□□□□□ -0.11
SCLT1-205ENST00000503401 FBXO17Q96EF6 278 aa14.35□□□□□ -0.11
SCLT1-205ENST00000503401 SNX18Q96RF0 628 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms