RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 H7C1Q1 480 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ONECUT2O95948 504 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 PNPP00491 289 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 HRGP04196 525 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 THY1P04216 161 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ACHEP22303 614 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 EPHA8P29322 1005 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 DCTDP32321 178 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 CSNK2A1P68400 391 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SLC35A1P78382 337 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ERV3-1Q14264 604 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SOWAHCQ53LP3 525 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 TMEM31Q5JXX7 168 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ASB18Q6ZVZ8 466 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 UEVLDQ8IX04 471 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 OR1L3Q8NH93 324 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 STT3BQ8TCJ2 826 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SLC7A6Q92536 515 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ADIPOR1Q96A54 375 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ZBTB8AQ96BR9 441 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 RNF31Q96EP0 1072 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 NUDT9Q9BW91 350 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 MED20Q9H944 212 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 FBXO34Q9NWN3 711 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 C2orf42Q9NWW7 574 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SLC6A14Q9UN76 642 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 PLEKHA6Q9Y2H5 1048 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 NOSIPQ9Y314 301 aaKnown RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 IGLV3-12A0A075B6K2 115 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 A0A1B0GVT2 93 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 TLE3Q04726 772 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 THEM4Q5T1C6 240 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 RHOUQ7L0Q8 258 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 CPEB2Q7Z5Q1 589 aaKnown RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 THAP6Q8TBB0 222 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 CCDC74AQ96AQ1 378 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 PELI1Q96FA3 418 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 Q96M85 177 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ZFP3Q96NJ6 502 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SOSTQ9BQB4 213 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ZCCHC4Q9H5U6 513 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 NLKQ9UBE8 527 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 MIOXQ9UGB7 285 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 STEAP1Q9UHE8 339 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 GOLGB1Q14789 3259 aaKnown RBP6.71□□□□□ -1.33
PDGFC-203ENST00000502773 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 IFITM5A6NNB3 132 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 B4DXG7 233 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 LINC01387J3KSC0 135 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 AQP8O94778 261 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 DDAH2O95865 285 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 WNT1P04628 370 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 CELA2BP08218 269 aaPredicted RBP6.71□□□□□ -1.33
PDGFC-203ENST00000502773 H2BFMP0C1H6 154 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 RRAS2P62070 204 aaPredicted RBP6.71□□□□□ -1.33
PDGFC-203ENST00000502773 ZP2Q05996 745 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 EIF3IQ13347 325 aaKnown RBP6.71□□□□□ -1.33
PDGFC-203ENST00000502773 CLINT1Q14677 625 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 TUSC1Q2TAM9 212 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 ELFN2Q5R3F8 820 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 LIN54Q6MZP7 749 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 TMEM91Q6ZNR0 172 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 CREB3L2Q70SY1 520 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 METTL27Q8N6F8 245 aaPredicted RBP6.71□□□□□ -1.33
PDGFC-203ENST00000502773 VRK1Q99986 396 aaPredicted RBP6.71□□□□□ -1.33
PDGFC-203ENST00000502773 VN1R1Q9GZP7 353 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 MIXL1Q9H2W2 232 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 CHST11Q9NPF2 352 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 TMEM138Q9NPI0 162 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 VSX1Q9NZR4 365 aaPredicted RBP6.71□□□□□ -1.33
PDGFC-203ENST00000502773 TBC1D24Q9ULP9 559 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 GTF2A1LQ9UNN4 478 aa6.71□□□□□ -1.33
PDGFC-203ENST00000502773 PCDHGA9Q9Y5G4 932 aaKnown RBP6.71□□□□□ -1.33
PDGFC-203ENST00000502773 LINC00587B1AMM8 73 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 TCAPO15273 167 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 EEF1E1O43324 174 aaKnown RBP6.71□□□□□ -1.34
PDGFC-203ENST00000502773 ICOSLGO75144 302 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 IGHG1P01857 330 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 ELK1P19419 428 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 TGFBR1P36897 503 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 IFITM3Q01628 133 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 GRK1Q15835 563 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 NNATQ16517 81 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 TEX30Q5JUR7 227 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 TMEM164Q5U3C3 297 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 FNDC7Q5VTL7 733 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 MEX3DQ86XN8 651 aaKnown RBP6.71□□□□□ -1.34
PDGFC-203ENST00000502773 CDC20BQ86Y33 519 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 CDH26Q8IXH8 852 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 DEFB119Q8N690 84 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 GATSQ8NAP1 163 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 OR4N2Q8NGD1 307 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 OTOSQ8NHW6 89 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 ZNF501Q96CX3 271 aaPredicted RBP6.71□□□□□ -1.34
PDGFC-203ENST00000502773 S100A13Q99584 98 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 ISG20L2Q9H9L3 353 aaKnown RBP6.71□□□□□ -1.34
PDGFC-203ENST00000502773 ST6GALNAC2Q9UJ37 374 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 SCP2D1Q9UJQ7 156 aa6.71□□□□□ -1.34
PDGFC-203ENST00000502773 ZNF346Q9UL40 294 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms