RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 QDPRP09417 244 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 CPMP14384 443 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 HIST1H1TP22492 207 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 FRKP42685 505 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 RGS19P49795 217 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 RPS11P62280 158 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 ELAVL2Q12926 359 aaKnown RBP9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 EIPR1Q53HC9 387 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 HIST2H3AQ71DI3 136 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 TMEM104Q8NE00 496 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 NLGN2Q8NFZ4 835 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR8D1Q8WZ84 308 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 ARHGDIGQ99819 225 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZDHHC5Q9C0B5 715 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 CRLF2Q9HC73 371 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 SCN5AQ14524 2016 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 C7orf77A4D0Y5 90 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 C11orf98E9PRG8 122 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 PHOX2AO14813 284 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZIC2O95409 532 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 PLGP00747 810 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 TACSTD2P09758 323 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 PRF1P14222 555 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 MAOAP21397 527 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 DNASE1L1P49184 302 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 SLC22A6Q4U2R8 563 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 GLYATL3Q5SZD4 288 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR2A2Q6IF42 318 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 SLC8B1Q6J4K2 584 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 MRGPREQ86SM8 312 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 COMMD2Q86X83 199 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 VN1R2Q8NFZ6 395 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR2L2Q8NH16 312 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 C15orf40Q8WUR7 153 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 INSM2Q96T92 566 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 ALG12Q9BV10 488 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 FAM117AQ9C073 453 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 BARX1Q9HBU1 254 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 HTTP42858 3142 aa9.67□□□□□ -0.86
TRAPPC12-223ENST00000497597 COLCA2A8K830 154 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 ZNF705GA8MUZ8 300 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 SLC33A1O00400 549 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 XRCC3O43542 346 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 SOX15O60248 233 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 CTAG2O75638 210 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 GLI4P10075 376 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 TYRP1P17643 537 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 PSMB6P28072 239 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 GPR143P51810 404 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 UBE3DQ7Z6J8 389 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 CSNK1A1LQ8N752 337 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 UBAC2Q8NBM4 344 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 NUS1Q96E22 293 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 LHX9Q9NQ69 397 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 ABT1Q9ULW3 272 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 F5P12259 2224 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 ATG2BQ96BY7 2078 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 CASP8AP2Q9UKL3 1982 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 BTBD17A6NE02 478 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 GPRIN2O60269 458 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 DUSP11O75319 330 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 NDUFB2O95178 105 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 TBX6O95947 436 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 KNG1P01042 644 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 RNH1P13489 461 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 WASP42768 502 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 RPL7L1Q6DKI1 246 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 ASTLQ6HA08 431 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 EID2Q8N6I1 236 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 KIRREL1Q96J84 757 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 LYSMD1Q96S90 227 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 S100A13Q99584 98 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 SFXN1Q9H9B4 322 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 MKKSQ9NPJ1 570 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 MSGN1A6NI15 193 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 AP4M1O00189 453 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 IFNA17P01571 189 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 MAPK3P27361 379 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 PRKAR1BP31321 381 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 EIF1AXP47813 144 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 NPY4RP50391 375 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 LRP11Q86VZ4 500 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 PARGQ86W56 976 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 BHLHE23Q8NDY6 225 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 OR10G6Q8NH81 332 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 EDEM2Q9BV94 578 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 SEC11CQ9BY50 192 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 PLEKHA1Q9HB21 404 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 CCL26Q9Y258 94 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 LSM5Q9Y4Y9 91 aaKnown RBP9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 WNT6Q9Y6F9 365 aa9.66□□□□□ -0.86
TRAPPC12-223ENST00000497597 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 A0A0A6YYH2 397 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 A6NJ64 397 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 OGG1O15527 345 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 TNFSF12O43508 249 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 SRPX2O60687 465 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 STK17BO94768 372 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 EOMESO95936 686 aa9.65□□□□□ -0.86
TRAPPC12-223ENST00000497597 DBIP07108 87 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms