RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 GPA33Q99795 319 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 DGCR6LQ9BY27 220 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 GRIP2Q9C0E4 1043 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 OR52D1Q9H346 318 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 C1orf198Q9H425 327 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 CCNB1IP1Q9NPC3 277 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 CBLN4Q9NTU7 201 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 PDP1Q9P0J1 537 aaPredicted RBP14.25□□□□□ -0.13
SF3A1-209ENST00000496189 PMF1-BGLAPU3KQ54 211 aa14.25□□□□□ -0.13
SF3A1-209ENST00000496189 RAI1Q7Z5J4 1906 aaPredicted RBP14.25□□□□□ -0.13
SF3A1-209ENST00000496189 E7EQL1 145 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 AHCYL1O43865 530 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 SOD3P08294 240 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 APEHP13798 732 aaKnown RBP14.24□□□□□ -0.13
SF3A1-209ENST00000496189 ANXA8P13928 327 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 CD99P14209 185 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 SDHAP31040 664 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 GIPRP48546 466 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 MRPS34P82930 218 aaKnown RBP14.24□□□□□ -0.13
SF3A1-209ENST00000496189 RUNX1T1Q06455 604 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 ETFDHQ16134 617 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 PGGHGQ32M88 737 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 SHQ1Q6PI26 577 aaKnown RBP14.24□□□□□ -0.13
SF3A1-209ENST00000496189 PRSS57Q6UWY2 283 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF620Q6ZNG0 422 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 RASSF6Q6ZTQ3 369 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 DTX2Q86UW9 622 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 WDFY1Q8IWB7 410 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 HDAC2Q92769 488 aaKnown RBP14.24□□□□□ -0.13
SF3A1-209ENST00000496189 KCNK17Q96T54 332 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 FEVQ99581 238 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 TRAF4Q9BUZ4 470 aaPredicted RBP14.24□□□□□ -0.13
SF3A1-209ENST00000496189 IFT27Q9BW83 186 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 SIAEQ9HAT2 523 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 BARX1Q9HBU1 254 aaPredicted RBP14.24□□□□□ -0.13
SF3A1-209ENST00000496189 NRIP3Q9NQ35 241 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 B3GNT2Q9NY97 397 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 CDH10Q9Y6N8 788 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 AKAP9Q99996 3911 aa14.24□□□□□ -0.13
SF3A1-209ENST00000496189 PRR14LQ5THK1 2151 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 IQCMA0A1B0GVH7 501 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 IMPA2O14732 288 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 IDH3BO43837 385 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 SLC2A10O95528 541 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 PAX1P15863 534 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 NOS3P29474 1203 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 ADAM8P78325 824 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 SGCAQ16586 387 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 CD300LDQ6UXZ3 194 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 ADCK1Q86TW2 530 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 HIPK1Q86Z02 1210 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 CLDN22Q8N7P3 220 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 ATG16L2Q8NAA4 619 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF519Q8TB69 540 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 DNAJC9Q8WXX5 260 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 NSMAFQ92636 917 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 SAMD8Q96LT4 415 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 SH3GL3Q99963 347 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 SEC61A2Q9H9S3 476 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF701Q9NV72 531 aaPredicted RBP14.23□□□□□ -0.13
SF3A1-209ENST00000496189 KIF17Q9P2E2 1029 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 IL20RAQ9UHF4 553 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 FBXO9Q9UK97 447 aaPredicted RBP14.23□□□□□ -0.13
SF3A1-209ENST00000496189 ADAM18Q9Y3Q7 739 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 IER3IP1Q9Y5U9 82 aa14.23□□□□□ -0.13
SF3A1-209ENST00000496189 TEX13CA0A0J9YWL9 993 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 A0A1W2PPL8 197 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 G3V2T6 193 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF26P17031 533 aaPredicted RBP14.22□□□□□ -0.13
SF3A1-209ENST00000496189 CDKN1AP38936 164 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 ZNF133P52736 654 aaPredicted RBP14.22□□□□□ -0.13
SF3A1-209ENST00000496189 PCBD1P61457 104 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 RPS23P62266 143 aaKnown RBP14.22□□□□□ -0.13
SF3A1-209ENST00000496189 SNRPD2P62316 118 aaKnown RBP14.22□□□□□ -0.13
SF3A1-209ENST00000496189 HSF2Q03933 536 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 FMODQ06828 376 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 KRR1Q13601 381 aaKnown RBP14.22□□□□□ -0.13
SF3A1-209ENST00000496189 DAG1Q14118 895 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 DNM1P34Q6PK57 102 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 VHLLQ6RSH7 139 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 THSD4Q6ZMP0 1018 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 FAM122BQ7Z309 247 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 JAZF1Q86VZ6 243 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 ZDHHC13Q8IUH4 622 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 SKA3Q8IX90 412 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 LRRC18Q8N456 261 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 NUP37Q8NFH4 326 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 OR1J2Q8NGS2 313 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 OR5K1Q8NHB7 308 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 PYDC1Q8WXC3 89 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 CENPNQ96H22 339 aaPredicted RBP14.22□□□□□ -0.13
SF3A1-209ENST00000496189 Q96M85 177 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 ERMAPQ96PL5 475 aaPredicted RBP14.22□□□□□ -0.13
SF3A1-209ENST00000496189 NTN4Q9HB63 628 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 CA10Q9NS85 328 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 TBC1D23Q9NUY8 699 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 IL20Q9NYY1 176 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 BAIAP2Q9UQB8 552 aa14.22□□□□□ -0.13
SF3A1-209ENST00000496189 HEATR1Q9H583 2144 aaKnown RBP14.21□□□□□ -0.13
SF3A1-209ENST00000496189 IGHV2OR16-5A0A0B4J2B6 119 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms