RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TAF9Q16594 264 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 ESCO2Q56NI9 601 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 SPRNQ5BIV9 151 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 ZMAT1Q5H9K5 638 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 THEM4Q5T1C6 240 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
COL1A1-209ENST00000495677 DHRS4L2Q6PKH6 230 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 MSANTD1Q6ZTZ1 278 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 ZNF101Q8IZC7 436 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 TMEM86BQ8N661 226 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 ICA1LQ8NDH6 482 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 IPCEF1Q8WWN9 437 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-209ENST00000495677 DACT3Q96B18 629 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-209ENST00000495677 SORT1Q99523 831 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 NUF2Q9BZD4 464 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 EVA1AQ9H8M9 152 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 TMEM27Q9HBJ8 222 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 NOX4Q9NPH5 578 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 TAS2R5Q9NYW4 299 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 SELENONQ9NZV5 590 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 EIF3KQ9UBQ5 218 aaKnown RBP11.29□□□□□ -0.6
COL1A1-209ENST00000495677 LGALS13Q9UHV8 139 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 TRIM33Q9UPN9 1127 aa11.29□□□□□ -0.6
COL1A1-209ENST00000495677 TET2Q6N021 2002 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-209ENST00000495677 CENPBD1B2RD01 187 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 LRRN3E7EW58 273 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 C11orf98E9PRG8 122 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 BIRC5O15392 142 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 ANP32DO95626 131 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 QDPRP09417 244 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 TNFRSF1AP19438 455 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 STOMP27105 288 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 NME5P56597 212 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 KRTAP10-3P60369 221 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 BTG1P62324 171 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 GLO1Q04760 184 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 FADDQ13158 208 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 PDCD1Q15116 288 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 OR1Q1Q15612 314 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 Q6YL49 198 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 SLC25A40Q8TBP6 338 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 GEMIN6Q8WXD5 167 aaKnown RBP11.28□□□□□ -0.6
COL1A1-209ENST00000495677 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL1A1-209ENST00000495677 UBE2FQ969M7 185 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 MCHR2Q969V1 340 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 SIGLEC11Q96RL6 698 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 DCLRE1CQ96SD1 692 aaKnown RBP11.28□□□□□ -0.6
COL1A1-209ENST00000495677 ZBTB18Q99592 522 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 SEPHS2Q99611 448 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 MRPL13Q9BYD1 178 aaKnown RBP11.28□□□□□ -0.6
COL1A1-209ENST00000495677 OR2J1Q9GZK6 312 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 DCAF16Q9NXF7 216 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 OR5V1Q9UGF6 321 aa11.28□□□□□ -0.6
COL1A1-209ENST00000495677 SOX21Q9Y651 276 aaPredicted RBP11.28□□□□□ -0.6
COL1A1-209ENST00000495677 TPST2O60704 377 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 OR6A2O95222 327 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 WNT5AP41221 380 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 SLC1A6P48664 564 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 ZNF84P51523 738 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 TNFAIP6P98066 277 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-209ENST00000495677 DEFB112Q30KQ8 113 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 MTX3Q5HYI7 312 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 ZNF774Q6NX45 483 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 FIP1L1Q6UN15 594 aaKnown RBP11.27□□□□□ -0.61
COL1A1-209ENST00000495677 BTNL3Q6UXE8 466 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 ZNF771Q7L3S4 317 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-209ENST00000495677 ZER1Q7Z7L7 766 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 COMTD1Q86VU5 262 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 MUC20Q8N307 709 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-209ENST00000495677 POU5F2Q8N7G0 328 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 RAB40AQ8WXH6 277 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 VPS33AQ96AX1 596 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 THOC1Q96FV9 657 aaKnown RBP11.27□□□□□ -0.61
COL1A1-209ENST00000495677 ARHGDIGQ99819 225 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 SPATA5L1Q9BVQ7 753 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 ROPN1BQ9BZX4 212 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-209ENST00000495677 RAD21L1Q9H4I0 556 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 RMND5AQ9H871 391 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 ROPN1Q9HAT0 212 aaPredicted RBP11.27□□□□□ -0.61
COL1A1-209ENST00000495677 SIAEQ9HAT2 523 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 POMT1Q9Y6A1 747 aa11.27□□□□□ -0.61
COL1A1-209ENST00000495677 LOC100509620A0A075B734 347 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 IGHV2-70DA0A0C4DH43 119 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 KIR2DS1A0A191URI9 304 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 SLC22A31A6NKX4 558 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 SDHDO14521 159 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 TPST1O60507 370 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 SERPINI2O75830 405 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 FSTL3O95633 263 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 IGHG1P01857 330 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 NUDT7P0C024 238 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 CCNOP22674 350 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 TUBG1P23258 451 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 MDH2P40926 338 aaKnown RBP11.26□□□□□ -0.61
COL1A1-209ENST00000495677 CDH12P55289 794 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 MRPS34P82930 218 aaKnown RBP11.26□□□□□ -0.61
COL1A1-209ENST00000495677 HSF2Q03933 536 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 ZMYND11Q15326 602 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 PABPC1L2AQ5JQF8 200 aa11.26□□□□□ -0.61
COL1A1-209ENST00000495677 C10orf128Q5T292 105 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms