RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ZNF250P15622 560 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF26P17031 533 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-208ENST00000494728 ACHEP22303 614 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 KDELR2P33947 212 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 GPR6P46095 362 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-208ENST00000494728 LCN6P62502 163 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 ERVK-25P63136 954 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 MRPS34P82930 218 aaKnown RBP9.94□□□□□ -0.82
VTI1A-208ENST00000494728 CD47Q08722 323 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 SLC36A2Q495M3 483 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 NRN1LQ496H8 165 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 SPATA46Q5T0L3 261 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 RGS7BPQ6MZT1 257 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-208ENST00000494728 TMEM53Q6P2H8 277 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 SLC25A47Q6Q0C1 308 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 RFPL4BQ6ZWI9 263 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 TSEN54Q7Z6J9 526 aaKnown RBP9.94□□□□□ -0.82
VTI1A-208ENST00000494728 TREML1Q86YW5 311 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 NRMQ8IXM6 262 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 SLC15A3Q8IY34 581 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 LINC01356Q8N9X3 169 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 ICA1LQ8NDH6 482 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 OR2T12Q8NG77 320 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 OR13C2Q8NGS9 318 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 AKR7LQ8NHP1 331 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 SH3GL1Q99961 368 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 POLR2J2Q9GZM3 115 aaKnown RBP9.94□□□□□ -0.82
VTI1A-208ENST00000494728 POLR2J3Q9H1A7 115 aaKnown RBP9.94□□□□□ -0.82
VTI1A-208ENST00000494728 TXNIPQ9H3M7 391 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 MS4A5Q9H3V2 200 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 RNF121Q9H920 327 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 CDH20Q9HBT6 801 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 LPAR2Q9HBW0 351 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 TAAR3PQ9P1P4 343 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 FBXL3Q9UKT7 428 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 MED31Q9Y3C7 131 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 CAPN7Q9Y6W3 813 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 NPIPB13A6NJU9 1138 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 C17orf100A8MU93 164 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 CENPBD1B2RD01 187 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 NPIPB4C9JG80 1138 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 CDC14BO60729 498 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 FARS2O95363 451 aaKnown RBP9.93□□□□□ -0.82
VTI1A-208ENST00000494728 NPPAP01160 153 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 IGHMP01871 453 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 SCG5P05408 212 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 LCKP06239 509 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 VIMP08670 466 aaKnown RBP9.93□□□□□ -0.82
VTI1A-208ENST00000494728 SAGP10523 405 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-208ENST00000494728 THRBP10828 461 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 IFI30P13284 250 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 LSP1P33241 339 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 THBS2P35442 1172 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 MPV17P39210 176 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF84P51523 738 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 KLF3P57682 345 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-208ENST00000494728 LMO4P61968 165 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 SELENOWP63302 87 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 CCL8P80075 99 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 MAPRE2Q15555 327 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 NKPD1Q17RQ9 610 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 TBC1D28Q2M2D7 210 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 SPRNQ5BIV9 151 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 ALG10Q5BKT4 473 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 AVPI1Q5T686 147 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 OTPQ5XKR4 325 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 C8orf82Q6P1X6 216 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-208ENST00000494728 OFCC1Q8IZS5 231 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF519Q8TB69 540 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 IPCEF1Q8WWN9 437 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-208ENST00000494728 RDH5Q92781 318 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 BPIFA2Q96DR5 249 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 WNT5BQ9H1J7 359 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 TREM2Q9NZC2 230 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 TMEFF2Q9UIK5 374 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF346Q9UL40 294 aaKnown RBP9.93□□□□□ -0.82
VTI1A-208ENST00000494728 MGAM2Q2M2H8 2515 aa9.93□□□□□ -0.82
VTI1A-208ENST00000494728 MEGF8Q7Z7M0 2845 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 ELOVL7A1L3X0 281 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 ZSCAN5BA6NJL1 495 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 CDC42EP2O14613 210 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 PPIHO43447 177 aaKnown RBP9.92□□□□□ -0.82
VTI1A-208ENST00000494728 GAAP10253 952 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 HNF1AP20823 631 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 LAP3P28838 519 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 GPR4P46093 362 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 SLC7A2P52569 658 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 DVL1P1P54792 670 aaPredicted RBP9.92□□□□□ -0.82
VTI1A-208ENST00000494728 UCP2P55851 309 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 PSG4Q00888 419 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 LIPEQ05469 1076 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 TBPL2Q6SJ96 375 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 UGT2A3Q6UWM9 527 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 FOXL2NBQ6ZUU3 175 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 OR1J1Q8NGS3 322 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 OR51A7Q8NH64 312 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 SYNPRQ8TBG9 265 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 POM121L2Q96KW2 1035 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 POFUT1Q9H488 388 aa9.92□□□□□ -0.82
VTI1A-208ENST00000494728 CCDC134Q9H6E4 229 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms