RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 HSD17B11Q8NBQ5 300 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 OR5B3Q8NH48 314 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 LINC01006Q8NI28 216 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 ZNF502Q8TBZ5 544 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 MARCH1Q8TCQ1 289 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 ISG20Q96AZ6 181 aaKnown RBP4.35□□□□□ -1.71
SMC2-205ENST00000493955 SYNRGQ9UMZ2 1314 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 PLEKHG2Q9H7P9 1386 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 PTPRTO14522 1441 aa4.35□□□□□ -1.71
SMC2-205ENST00000493955 TROQ12816 1431 aaPredicted RBP4.35□□□□□ -1.71
SMC2-205ENST00000493955 CEP170BQ9Y4F5 1589 aaPredicted RBP4.35□□□□□ -1.71
SMC2-205ENST00000493955 A0A0B4J2A0 478 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 IGKV1D-13A0A0B4J2D9 117 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 GLYATL1P3A0A0U1RQE8 302 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 KBTBD11-OT1A0A1B0GTJ5 212 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 HAT1O14929 419 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 SLC31A2O15432 143 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 AKR7A2O43488 359 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 NPIPB7O75200 414 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 IGKV3-15P01624 115 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 HPNP05981 417 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 IGKV1-13P0DP09 117 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 BCKDHBP21953 392 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 AQP2P41181 271 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 CLDN8P56748 225 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 LRRC10Q5BKY1 277 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 XKR4Q5GH76 650 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 TTC19Q6DKK2 380 aaPredicted RBP4.34□□□□□ -1.71
SMC2-205ENST00000493955 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 FBXL22Q6P050 247 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 IL34Q6ZMJ4 242 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 OR2L5Q8NG80 312 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 GLYATL2Q8WU03 294 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 CAPSLQ8WWF8 208 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 NDRG1Q92597 394 aaKnown RBP4.34□□□□□ -1.71
SMC2-205ENST00000493955 RASL11BQ9BPW5 248 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 YTHDF1Q9BYJ9 559 aaKnown RBP4.34□□□□□ -1.71
SMC2-205ENST00000493955 HRASLS2Q9NWW9 162 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 CLN8Q9UBY8 286 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 SHPKQ9UHJ6 478 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 MLH3Q9UHC1 1453 aa4.34□□□□□ -1.71
SMC2-205ENST00000493955 DNMT1P26358 1616 aaKnown RBP4.33□□□□□ -1.72
SMC2-205ENST00000493955 ATP7AQ04656 1500 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 IQSEC2Q5JU85 1478 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 EEA1Q15075 1411 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 A0A0G2JN53 185 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 USP27XA6NNY8 438 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 EMC8O43402 210 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 FAM189A1O60320 539 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 SERPINA5P05154 406 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 GIPP09681 153 aaPredicted RBP4.33□□□□□ -1.72
SMC2-205ENST00000493955 CSF3P09919 207 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 FUT3P21217 361 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 TAF6P49848 677 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 DOC2AQ14183 400 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 FZD2Q14332 565 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 ITIH4Q14624 930 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 SF3A2Q15428 464 aaKnown RBP4.33□□□□□ -1.72
SMC2-205ENST00000493955 CAVIN4Q5BKX8 364 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 LCN12Q6JVE5 192 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 TTC23LQ6PF05 361 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 C6orf89Q6UWU4 347 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 CMTM1Q8IZ96 169 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 OR10G9Q8NGN4 311 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 PIK3IP1Q96FE7 263 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 XPO6Q96QU8 1125 aaKnown RBP4.33□□□□□ -1.72
SMC2-205ENST00000493955 OSBPL10Q9BXB5 764 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 UGT1A7Q9HAW7 530 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 UGT1A8Q9HAW9 530 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 EML4Q9HC35 981 aaKnown RBP4.33□□□□□ -1.72
SMC2-205ENST00000493955 PLSCR3Q9NRY6 295 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 AHSPQ9NZD4 102 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 GOLT1BQ9Y3E0 138 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 CHTOPQ9Y3Y2 248 aaKnown RBP4.33□□□□□ -1.72
SMC2-205ENST00000493955 GTF3C1Q12789 2109 aa4.33□□□□□ -1.72
SMC2-205ENST00000493955 XIRP1Q702N8 1843 aaKnown RBP4.33□□□□□ -1.72
SMC2-205ENST00000493955 TCOF1Q13428 1488 aaKnown RBP4.32□□□□□ -1.72
SMC2-205ENST00000493955 F6UB75 175 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 TNFSF13O75888 250 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 KLF8O95600 359 aaPredicted RBP4.32□□□□□ -1.72
SMC2-205ENST00000493955 FGFR1OPO95684 399 aaKnown RBP4.32□□□□□ -1.72
SMC2-205ENST00000493955 SERPINB5P36952 375 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 CCR8P51685 355 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 NUP107P57740 925 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 WDR43Q15061 677 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMC2-205ENST00000493955 FHL5Q5TD97 284 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 OTPQ5XKR4 325 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 PLCXD3Q63HM9 321 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 OR10R2Q8NGX6 335 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 OR2G3Q8NGZ4 309 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 IMMP1LQ96LU5 166 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 SH3GL3Q99963 347 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 BCL7BQ9BQE9 202 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 ANKRD60Q9BZ19 345 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 LYRM4Q9HD34 91 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 MTCH1Q9NZJ7 389 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 SLC17A4Q9Y2C5 497 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 TIAM1Q13009 1591 aa4.32□□□□□ -1.72
SMC2-205ENST00000493955 COL2A1P02458 1487 aaPredicted RBP4.32□□□□□ -1.72
SMC2-205ENST00000493955 SCN2AQ99250 2005 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms