RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 NPIPA3F8WFD2 350 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 H0YAE9 185 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 TRIAP1O43715 76 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 FZD7O75084 574 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 NDUFB2O95178 105 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 PMS2P2O95744 297 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CLIC3O95833 236 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 GNAO1P09471 354 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ADORA3P0DMS8 318 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 EGR2P11161 476 aaPredicted RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CPN1P15169 458 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF708P17019 499 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CDH2P19022 906 aaPredicted RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 UQCRC1P31930 480 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 GGT2P36268 569 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 RPL4P36578 427 aaKnown RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CAPGP40121 348 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 P2RY4P51582 365 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 NUP107P57740 925 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 RPS4XP62701 263 aaKnown RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ERVK-25P63136 954 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 SLC35A1P78382 337 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 H3F3AP84243 136 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CDK5Q00535 292 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 RPL18Q07020 188 aaKnown RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ZP4Q12836 540 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 MFSD13AQ14CX5 517 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 INAQ16352 499 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 PRR30Q53SZ7 412 aaPredicted RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CLEC12AQ5QGZ9 265 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 SLX4IPQ5VYV7 408 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 TTC23Q5W5X9 447 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF324BQ6AW86 544 aaPredicted RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 SMARCD3Q6STE5 483 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 PLXDC2Q6UX71 529 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 NHLRC1Q6VVB1 395 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 NANOGNBQ7Z5D8 188 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CCDC71Q8IV32 467 aaPredicted RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CHERPQ8IWX8 916 aaKnown RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CLDN22Q8N7P3 220 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 LRRC75AQ8NAA5 344 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF555Q8NEP9 628 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 OR5M9Q8NGP3 310 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 OR4Q3Q8NH05 313 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 OR10D3Q8NH80 312 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 FANK1Q8TC84 345 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 FAR1Q8WVX9 515 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 NEU4Q8WWR8 484 aaPredicted RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ROBO4Q8WZ75 1007 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 SNRNP40Q96DI7 357 aaKnown RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF845Q96IR2 970 aaPredicted RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 Q96MF0 132 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 MUS81Q96NY9 551 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 IFT27Q9BW83 186 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 OR52D1Q9H346 318 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 TBC1D23Q9NUY8 699 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 ALKBH4Q9NXW9 302 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 AASSQ9UDR5 926 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 NDRG4Q9ULP0 352 aaKnown RBP5.82□□□□□ -1.48
TRA2B-216ENST00000493864 RAB26Q9ULW5 256 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 CAMK2AQ9UQM7 478 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 GMPPBQ9Y5P6 360 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 IER3IP1Q9Y5U9 82 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 POLEQ07864 2286 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 RELNP78509 3460 aa5.82□□□□□ -1.48
TRA2B-216ENST00000493864 FLNBO75369 2602 aaKnown RBP5.81□□□□□ -1.48
TRA2B-216ENST00000493864 USP9XQ93008 2570 aaPredicted RBP5.81□□□□□ -1.48
TRA2B-216ENST00000493864 PCNX1Q96RV3 2341 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 LRRK2Q5S007 2527 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 AQP7P3A6NL99 342 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 M0R129 80 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 BHLHE40O14503 412 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 BCKDKO14874 412 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 SMAD9O15198 467 aaKnown RBP5.81□□□□□ -1.48
TRA2B-216ENST00000493864 RNF13O43567 381 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 DENRO43583 198 aaKnown RBP5.81□□□□□ -1.48
TRA2B-216ENST00000493864 EIF1BO60739 113 aaKnown RBP5.81□□□□□ -1.48
TRA2B-216ENST00000493864 SERPINI2O75830 405 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 OR6A2O95222 327 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 SLC2A10O95528 541 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 PPP1R3DO95685 299 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 SFTPCP11686 197 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 HLA-DOBP13765 273 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 PPP3CBP16298 524 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 AHCYP23526 432 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 GTF2E2P29084 291 aaKnown RBP5.81□□□□□ -1.48
TRA2B-216ENST00000493864 SLC6A6P31641 620 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 HSPA13P48723 471 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 SMSP52788 366 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 MLLT10P55197 1068 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 LOXL3P58215 753 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 PRPS1P60891 318 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 CSNK2A1P68400 391 aaPredicted RBP5.81□□□□□ -1.48
TRA2B-216ENST00000493864 MYBPC1Q00872 1141 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 KLRB1Q12918 225 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 TAF11Q15544 211 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 SGCBQ16585 318 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 ZNF239Q16600 458 aaKnown RBP5.81□□□□□ -1.48
TRA2B-216ENST00000493864 PGGHGQ32M88 737 aa5.81□□□□□ -1.48
TRA2B-216ENST00000493864 ANKDD1AQ495B1 522 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms