RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 C1orf198Q9H425 327 aa6.05□□□□□ -1.44
TOP3A-207ENST00000493648 MAGIXQ9H6Y5 334 aa6.05□□□□□ -1.44
TOP3A-207ENST00000493648 ZNF442Q9H7R0 627 aa6.05□□□□□ -1.44
TOP3A-207ENST00000493648 SEC61A2Q9H9S3 476 aa6.05□□□□□ -1.44
TOP3A-207ENST00000493648 NRIP3Q9NQ35 241 aa6.05□□□□□ -1.44
TOP3A-207ENST00000493648 ZNF224Q9NZL3 707 aa6.05□□□□□ -1.44
TOP3A-207ENST00000493648 IER3IP1Q9Y5U9 82 aa6.05□□□□□ -1.44
TOP3A-207ENST00000493648 USF3Q68DE3 2245 aa6.05□□□□□ -1.44
TOP3A-207ENST00000493648 ITPR3Q14573 2671 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 CSMD1Q96PZ7 3565 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 A0A1W2PPL8 197 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 TCRBV5S2A0A599 114 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 SLC22A23A1A5C7 686 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 PRSS37A4D1T9 235 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 C12orf71A8MTZ7 269 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 H7C417 338 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 IMPA2O14732 288 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 SSX4O60224 188 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 UBOX5O94941 541 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 F12P00748 615 aaPredicted RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 IGHV4-39P01824 125 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 ERCC1P07992 297 aaPredicted RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 CST2P09228 141 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 INHBBP09529 407 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 PATE4P0C8F1 98 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 ZNF35P13682 527 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 HOXB6P17509 224 aaKnown RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 ATP6V1B2P21281 511 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 FPR3P25089 353 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 SDHAP31040 664 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 SLC6A6P31641 620 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 CDAP32320 146 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 APLNRP35414 380 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 RAD52P43351 418 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 RASSF2P50749 326 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 NUDT6P53370 316 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 DSCR9P59020 149 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 RPS23P62266 143 aaKnown RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 HSF2Q03933 536 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 FMODQ06828 376 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 SNTB2Q13425 540 aaKnown RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 EFNB3Q15768 340 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 TBC1D28Q2M2D7 210 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 MST1LQ2TV78 715 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 RFX4Q33E94 735 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 KRT80Q6KB66 452 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 C1orf94Q6P1W5 598 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 SMARCD3Q6STE5 483 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 FAM122BQ7Z309 247 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 ADCK1Q86TW2 530 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 BIVMQ86UB2 503 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 MYPOPQ86VE0 399 aaPredicted RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 ALDH16A1Q8IZ83 802 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 SLC30A7Q8NEW0 376 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 FGFBP3Q8TAT2 258 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 CLPTM1LQ96KA5 538 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 Q96M85 177 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 ERMAPQ96PL5 475 aaPredicted RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 GPX7Q96SL4 187 aaPredicted RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 VRK1Q99986 396 aaPredicted RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 RHNO1Q9BSD3 238 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 BTBD10Q9BSF8 475 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 WACQ9BTA9 647 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 PLK3Q9H4B4 646 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 REEP1Q9H902 201 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 CDH20Q9HBT6 801 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 NOX3Q9HBY0 568 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 DLL4Q9NR61 685 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 GDF2Q9UK05 429 aaPredicted RBP6.04□□□□□ -1.44
TOP3A-207ENST00000493648 ADAM18Q9Y3Q7 739 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 CMAHPQ9Y471 501 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 UGT2A1Q9Y4X1 527 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 TIMM10BQ9Y5J6 103 aa6.04□□□□□ -1.44
TOP3A-207ENST00000493648 F8P00451 2351 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 IGKV1D-43A0A0B4J1Z2 117 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 TEX13CA0A0J9YWL9 993 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 TRIM64A6NGJ6 449 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 TRIM64BA6NI03 449 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 AQP12BA6NM10 295 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 H7C1Q1 480 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 GNGT2O14610 69 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 ACOT8O14734 319 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
TOP3A-207ENST00000493648 IDH3BO43837 385 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 NDUFS7O75251 213 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 KHDRBS3O75525 346 aaKnown RBP6.03□□□□□ -1.44
TOP3A-207ENST00000493648 DNAJC8O75937 253 aaPredicted RBP6.03□□□□□ -1.44
TOP3A-207ENST00000493648 ATP5HO75947 161 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 CCNB2O95067 398 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 PPP1R3DO95685 299 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 TXNDC12O95881 172 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 MMP7P09237 267 aaPredicted RBP6.03□□□□□ -1.44
TOP3A-207ENST00000493648 RAP2AP10114 183 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 APEHP13798 732 aaKnown RBP6.03□□□□□ -1.44
TOP3A-207ENST00000493648 ZNF26P17031 533 aaPredicted RBP6.03□□□□□ -1.44
TOP3A-207ENST00000493648 ZNF32P17041 273 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 MSR1P21757 451 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 LAP3P28838 519 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 NOS3P29474 1203 aa6.03□□□□□ -1.44
TOP3A-207ENST00000493648 GLRXP35754 106 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms