RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 FABP12A6NFH5 140 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 TMEM212A6NML5 194 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 TRAF3IP2O43734 574 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-216ENST00000492977 SLC19A2O60779 497 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 AQP8O94778 261 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 IGHG1P01857 330 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 SPARCP09486 303 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 FTH1P19P0C7X4 201 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 PSKH1P11801 424 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF43P17038 809 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 RAB3BP20337 219 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 PTBP1P26599 531 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTPN7-216ENST00000492977 RPS27P42677 84 aaKnown RBP12.54□□□□□ -0.4
PTPN7-216ENST00000492977 CSNK2A1P68400 391 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-216ENST00000492977 OC90Q02509 493 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-216ENST00000492977 FMODQ06828 376 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 RASGEF1BQ0VAM2 473 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 AIMP2Q13155 320 aaKnown RBP12.54□□□□□ -0.4
PTPN7-216ENST00000492977 MEP1BQ16820 701 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 ABHD17BQ5VST6 288 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 GPAT4Q86UL3 456 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 TMPRSS12Q86WS5 348 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF227Q86WZ6 799 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 GLB1L2Q8IW92 636 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 FAM83FQ8NEG4 500 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-216ENST00000492977 OR2G2Q8NGZ5 317 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 KCNE4Q8WWG9 221 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 FOXN4Q96NZ1 517 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 OR14A2Q96R54 314 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 PRRX2Q99811 253 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 NAA11Q9BSU3 229 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-216ENST00000492977 EMC6Q9BV81 110 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 ELOVL3Q9HB03 270 aa12.54□□□□□ -0.4
PTPN7-216ENST00000492977 A0A0G2JK05 382 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF814B7Z6K7 855 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 TNFRSF10AO00220 468 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 DNPH1O43598 174 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 VAMP5O95183 116 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 MAPK3P27361 379 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-216ENST00000492977 CASRP41180 1078 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 EVX1P49640 407 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 CCR9P51686 369 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 CLRN1P58418 232 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 EIF2B1Q14232 305 aaKnown RBP12.53□□□□□ -0.4
PTPN7-216ENST00000492977 HSD17B12Q53GQ0 312 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 IDNKQ5T6J7 187 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF544Q6NX49 715 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 SFXN4Q6P4A7 337 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 FAM131AQ6UXB0 335 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 WDFY1Q8IWB7 410 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 IL22RA1Q8N6P7 574 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 NOXO1Q8NFA2 376 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 RNF128Q8TEB7 428 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 HSD17B8Q92506 261 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 FER1L6-AS2Q96M78 137 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 AMELYQ99218 206 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 ABHD6Q9BV23 337 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 SRRQ9GZT4 340 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 COMMD4Q9H0A8 199 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 ZCCHC4Q9H5U6 513 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 LRFN1Q9P244 771 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 IL17BQ9UHF5 180 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 ING1Q9UK53 422 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-216ENST00000492977 OTOGLQ3ZCN5 2332 aa12.53□□□□□ -0.4
PTPN7-216ENST00000492977 A0A0G2JMM0 328 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 A0A1W2PPB8 328 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 A0A1W2PRS3 328 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 LRRC3CA6NJW4 275 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 OR4C45A6NMZ5 311 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 NOTOA8MTQ0 251 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 KIR3DP1A8MWS1 328 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 CDK2AP1O14519 115 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 MAGEB3O15480 346 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.4
PTPN7-216ENST00000492977 HPGDSO60760 199 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 TMCC2O75069 709 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 PGA4P0DJD7 388 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 PGA3P0DJD8 388 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 SRMP19623 302 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 CD96P40200 585 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 CD97P48960 835 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 B3GALT5-AS1P59052 145 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 DEFA1P59665 94 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 DEFA3P59666 94 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 POU4F3Q15319 338 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 TOMM20Q15388 145 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 ZNF79Q15937 498 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 Q499Y3 187 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 KRT77Q7Z794 578 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.52□□□□□ -0.4
PTPN7-216ENST00000492977 GDPD1Q8N9F7 314 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 OR52N5Q8NH56 324 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 RGP1Q92546 391 aaPredicted RBP12.52□□□□□ -0.4
PTPN7-216ENST00000492977 THRSPQ92748 146 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 SOSTQ9BQB4 213 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 SP140LQ9H930 580 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 ZFP64Q9NPA5 681 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 NOX4Q9NPH5 578 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 AHCTF1Q8WYP5 2266 aa12.52□□□□□ -0.4
PTPN7-216ENST00000492977 FREM3P0C091 2139 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms