RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 MAB21L2Q9Y586 359 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 V9GYH0 126 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 MEGF8Q7Z7M0 2845 aa11.58□□□□□ -0.56
HDAC3-213ENST00000492506 A0A1W2PRB8 838 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 GXYLT2A0PJZ3 443 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 PQLC2LA1A4F0 135 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 ELOVL7A1L3X0 281 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 ALG1L2C9J202 215 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 AP3D1O14617 1153 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 EFNA2O43921 213 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 MPZL2O60487 215 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 APOL3O95236 402 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 LCKP06239 509 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 IGHV4-31P0DP07 118 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 NUP62P37198 522 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-213ENST00000492506 RFX3P48380 749 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 CCT3P49368 545 aaKnown RBP11.57□□□□□ -0.56
HDAC3-213ENST00000492506 NUDT6P53370 316 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 P2RY6Q15077 328 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 TATDN3Q17R31 274 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 CPTPQ5TA50 214 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 HACD4Q5VWC8 232 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 LAMTOR1Q6IAA8 161 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 EIF3MQ7L2H7 374 aaKnown RBP11.57□□□□□ -0.56
HDAC3-213ENST00000492506 OR8H3Q8N146 312 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 LRRC17Q8N6Y2 441 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 CLDN22Q8N7P3 220 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 C19orf18Q8NEA5 215 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 OR4C3Q8NH37 302 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 HOXB13Q92826 284 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-213ENST00000492506 KISS1RQ969F8 398 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-213ENST00000492506 ZBTB8AQ96BR9 441 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 ELP4Q96EB1 424 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 BBS4Q96RK4 519 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 GABARAPL3Q9BY60 117 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 SRXN1Q9BYN0 137 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 ACPTQ9BZG2 426 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 RIBC2Q9H4K1 309 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 DCAF13Q9NV06 445 aaKnown RBP11.57□□□□□ -0.56
HDAC3-213ENST00000492506 MED17Q9NVC6 651 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 KLHL13Q9P2N7 655 aa11.57□□□□□ -0.56
HDAC3-213ENST00000492506 MRTO4Q9UKD2 239 aaKnown RBP11.57□□□□□ -0.56
HDAC3-213ENST00000492506 DYSFO75923 2080 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 GNG14A0A1W2PPG7 69 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 hCG_1807616A0A1W2PRN6 198 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 PIP5K1BO14986 540 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 GATCO43716 136 aaKnown RBP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 CRCPO75575 148 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 PGRP06401 933 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 IFI30P13284 250 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 ZNF16P17020 682 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 CBLP22681 906 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 TIA1P31483 386 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 MAP3K8P41279 467 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 NCBP2P52298 156 aaKnown RBP eCLIP11.56□□□□□ -0.561e-7■□□□□ 8.9
HDAC3-213ENST00000492506 PSMD4P55036 377 aaKnown RBP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 CARD18P57730 90 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 DSCR9P59020 149 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 POLR2GP62487 172 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 IRF3Q14653 427 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 RNPS1Q15287 305 aaKnown RBP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 ATP6AP1LQ52LC2 224 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 UNC50Q53HI1 259 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 TMEM201Q5SNT2 666 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 TRIQKQ629K1 86 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 CYB5R2Q6BCY4 276 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 CLEC2AQ6UVW9 174 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 ZNF600Q6ZNG1 722 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 AHSA2Q719I0 299 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 BHLHA15Q7RTS1 189 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 TIGD4Q8IY51 512 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 ZNF525Q8N782 197 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 ZNF431Q8TF32 576 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 KLHL15Q96M94 604 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 SORCS2Q96PQ0 1159 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 MARVELD1Q9BSK0 173 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 CACNG6Q9BXT2 260 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 EBPLQ9BY08 206 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 SHARPINQ9H0F6 387 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 GLIPR2Q9H4G4 154 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 GP6Q9HCN6 339 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 C14orf119Q9NWQ9 140 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 MCUBQ9NWR8 336 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 ERVK13-1Q9NX77 482 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 SIRT5Q9NXA8 310 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 SLC23A1Q9UHI7 598 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 ING1Q9UK53 422 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-213ENST00000492506 KCNK7Q9Y2U2 307 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 ALG5Q9Y673 324 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 CACNG2Q9Y698 323 aa11.56□□□□□ -0.56
HDAC3-213ENST00000492506 LOC100506127A0A0U1RQW1 187 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 E7EQL1 145 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 H3BUI4 141 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 CXCR6O00574 342 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 KIAA0513O60268 411 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 LMX1BO60663 402 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 IL1AP01583 271 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 NGFRP08138 427 aa11.55□□□□□ -0.56
HDAC3-213ENST00000492506 SLC25A16P16260 332 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms