RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	CENPBD1	B2RD01	187 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	FAM157A	C9JC47	383 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	NME4	O00746	187 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	SNAP29	O95721	258 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	CLPTM1	O96005	669 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	GAA	P10253	952 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	CCL2	P13500	99 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	ZNF250	P15622	560 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	RAD52	P43351	418 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	MAGEB1	P43366	347 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	DAP3	P51398	398 aa	Known RBP	13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	PCGF3	Q3KNV8	242 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	ICA1L	Q8NDH6	482 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	OR2T12	Q8NG77	320 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	ZNF519	Q8TB69	540 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	ZNF347	Q96SE7	839 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	PRSS27	Q9BQR3	290 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	BCL2L14	Q9BZR8	327 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	OCEL1	Q9H607	264 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	MEPE	Q9NQ76	525 aa	Predicted RBP	13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	TREM2	Q9NZC2	230 aa		13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170	STX18	Q9P2W9	335 aa	Known RBP	13.12	□□□□□ -0.31
MRPL55-231	ENST00000492170		A0A0A6YYJ9	748 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	NDUFAB1	O14561	156 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	MGRN1	O60291	552 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	RP2	O75695	350 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	OR7A10	O76100	309 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	MT-ND1	P03886	318 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	MT-ND5	P03915	603 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	F13B	P05160	661 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	APLNR	P35414	380 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	RBM34	P42696	430 aa	Known RBP	13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	SLC7A2	P52569	658 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	UCP2	P55851	309 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	TAS2R41	P59536	307 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	MYBPC1	Q00872	1141 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	TEK	Q02763	1124 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	HSF2	Q03933	536 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	RUNX1T1	Q06455	604 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	RPL18	Q07020	188 aa	Known RBP	13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	MOG	Q16653	247 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	HIST3H3	Q16695	136 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	DEF8	Q6ZN54	512 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	MEX3D	Q86XN8	651 aa	Known RBP	13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	MICU2	Q8IYU8	434 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	FITM2	Q8N6M3	262 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	SYT14	Q8NB59	555 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	ASB10	Q8WXI3	467 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	TSPAN32	Q96QS1	320 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	KCNN2	Q9H2S1	579 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	INIP	Q9NRY2	104 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	ARL8B	Q9NVJ2	186 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	NKIRAS2	Q9NYR9	191 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	TAGLN3	Q9UI15	199 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	BAG5	Q9UL15	447 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	SH3GLB1	Q9Y371	365 aa		13.11	□□□□□ -0.31
MRPL55-231	ENST00000492170	TRAV20	A0A0B4J274	112 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	ELOVL7	A1L3X0	281 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	WNT9B	O14905	357 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	CDC14B	O60729	498 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	TRMU	O75648	421 aa	Known RBP	13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	ACADS	P16219	412 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	FUT1	P19526	365 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	UGT2B15	P54855	530 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	PSME3	P61289	254 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	ERVS71-1	P61550	626 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	CCL8	P80075	99 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	LIPE	Q05469	1076 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	KRT72	Q14CN4	511 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	C10orf128	Q5T292	105 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	LRRC18	Q8N456	261 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	TEX29	Q8N6K0	151 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	CCDC197	Q8NCU1	140 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	PFN4	Q8NHR9	129 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	TMEM239	Q8WW34	195 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	SGTB	Q96EQ0	304 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	SEPHS2	Q99611	448 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	MRPL13	Q9BYD1	178 aa	Known RBP	13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	POLR2J2	Q9GZM3	115 aa	Known RBP	13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	POLR2J3	Q9H1A7	115 aa	Known RBP	13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	CCNB1IP1	Q9NPC3	277 aa		13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	GMPR2	Q9P2T1	348 aa	Known RBP	13.1	□□□□□ -0.31
MRPL55-231	ENST00000492170	TPD52L2	O43399	206 aa	Known RBP	13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	OR5F1	O95221	314 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	IGF2	P01344	180 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	MMP7	P09237	267 aa	Predicted RBP	13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	NR2C1	P13056	603 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	ANPEP	P15144	967 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	KDELR2	P33947	212 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	AQP2	P41181	271 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	ZNF133	P52736	654 aa	Predicted RBP	13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	LMO4	P61968	165 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	NKAIN4	Q8IVV8	208 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	OR1J1	Q8NGS3	322 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	TMEM255B	Q8WV15	326 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	RAB39B	Q96DA2	213 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	ZNF665	Q9H7R5	613 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	SIAE	Q9HAT2	523 aa		13.09	□□□□□ -0.31
MRPL55-231	ENST00000492170	SPAG4	Q9NPE6	437 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms