RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 NAP1L3Q99457 506 aaPredicted RBP2.36□□□□□ -2.03
PHC3-213ENST00000491258 NPAS2Q99743 824 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 ATG10Q9H0Y0 220 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 C5orf66Q9H5L9 145 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 TRIM45Q9H8W5 580 aaPredicted RBP2.36□□□□□ -2.03
PHC3-213ENST00000491258 ANKHQ9HCJ1 492 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 MRGBPQ9NV56 204 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 TAS2R13Q9NYV9 303 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 SEC14L3Q9UDX4 400 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 TEKT2Q9UIF3 430 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 TRMT6Q9UJA5 497 aaKnown RBP2.36□□□□□ -2.03
PHC3-213ENST00000491258 ZNF835Q9Y2P0 537 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 MAD1L1Q9Y6D9 718 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 BIRC6Q9NR09 4857 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 PCLOQ9Y6V0 5065 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 HELZP42694 1942 aaKnown RBP2.36□□□□□ -2.03
PHC3-213ENST00000491258 ANAPC1Q9H1A4 1944 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 THADAQ6YHU6 1953 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 PKD1L1Q8TDX9 2849 aa2.36□□□□□ -2.03
PHC3-213ENST00000491258 RYR3Q15413 4870 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 ATG2BQ96BY7 2078 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 PLXND1Q9Y4D7 1925 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 ZNF860A6NHJ4 632 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 CCT8L1PA6NM43 557 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 GABRR3A8MPY1 467 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 A8MXE2 369 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 ZNF732B4DXR9 585 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 NPIPA5E9PKD4 350 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 NPIPA3F8WFD2 350 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 PGRMC1O00264 195 aaKnown RBP2.35□□□□□ -2.03
PHC3-213ENST00000491258 CDC7O00311 574 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 CCL21O00585 134 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 DNALI1O14645 258 aaPredicted RBP2.35□□□□□ -2.03
PHC3-213ENST00000491258 NDC80O14777 642 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 TTI1O43156 1089 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 OR1F1O43749 312 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 B4GALT2O60909 372 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 BANF1O75531 89 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 SIX3O95343 332 aaPredicted RBP2.35□□□□□ -2.03
PHC3-213ENST00000491258 IGLV1-47P01700 117 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 SERPINA6P08185 405 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 HIST1H2AGP0C0S8 130 aaPredicted RBP2.35□□□□□ -2.03
PHC3-213ENST00000491258 OR9G9P0C7N8 305 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 RGS4P49798 205 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 SMSP52788 366 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 AP1S2P56377 157 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 OR4D2P58180 307 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 MLF1P58340 268 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 SLC26A5P58743 744 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 LINC00315P59091 139 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 RAB8AP61006 207 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 REEP5Q00765 189 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 RGS1Q08116 209 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 ZNF273Q14593 569 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 PPP1R3AQ16821 1122 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 RFTN2Q52LD8 501 aaPredicted RBP2.35□□□□□ -2.03
PHC3-213ENST00000491258 SPANXN3Q5MJ09 141 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 C6orf136Q5SQH8 315 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 STEAP4Q687X5 459 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 XKRXQ6PP77 449 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 C16orf54Q6UWD8 224 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 SBSNQ6UWP8 590 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 C17orf107Q6ZR85 190 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 GPR141Q7Z602 305 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 THOC6Q86W42 341 aaKnown RBP2.35□□□□□ -2.03
PHC3-213ENST00000491258 DOLPP1Q86YN1 238 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 CRLF3Q8IUI8 442 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 MKXQ8IYA7 352 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 PDIK1LQ8N165 341 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 SLC35F6Q8N357 371 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 KIF2BQ8N4N8 673 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 ACBD4Q8NC06 268 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 TRPV3Q8NET8 790 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 NT5CQ8TCD5 201 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 SLC5A11Q8WWX8 675 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 ANKRD7Q92527 254 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 NEIL2Q969S2 332 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 GPR137Q96N19 417 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 CCT8L2Q96SF2 557 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 ZNF184Q99676 751 aaPredicted RBP2.35□□□□□ -2.03
PHC3-213ENST00000491258 UTP23Q9BRU9 249 aaKnown RBP2.35□□□□□ -2.03
PHC3-213ENST00000491258 NAT9Q9BTE0 207 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 TXLNGYQ9BZA5 131 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 AICDAQ9GZX7 198 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 SPNS1Q9H2V7 528 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 RABEP2Q9H5N1 569 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 SNX12Q9UMY4 172 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 NPIPA1Q9UND3 350 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 MEMO1Q9Y316 297 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 PDZD2O15018 2839 aa2.35□□□□□ -2.03
PHC3-213ENST00000491258 PLXNB3Q9ULL4 1909 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 MYOFQ9NZM1 2061 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 TNRC6BQ9UPQ9 1833 aaKnown RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 LRIT2A6NDA9 550 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 SAGE2PA6NJ88 616 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 A8MUA0 341 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 C4orf51C9J302 202 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 C19orf84I3L1E1 186 aa2.34□□□□□ -2.03
PHC3-213ENST00000491258 PSMD12O00232 456 aaPredicted RBP2.34□□□□□ -2.03
PHC3-213ENST00000491258 TAPBPO15533 448 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms