RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 NSMAFQ92636 917 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 BEX2Q9BXY8 128 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 MYLK2Q9H1R3 596 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 OR51B6Q9H340 312 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 SMURF2Q9HAU4 748 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 CDH20Q9HBT6 801 aa15.44■□□□□ 0.06
HMGN1-219ENST00000491183 TRAV27A0A087WT01 109 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 SNAP29O95721 258 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 CLPTM1O96005 669 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 PTHP01270 115 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 IFNA2P01563 188 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 SAGP10523 405 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-219ENST00000491183 NAT2P11245 290 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 NCK1P16333 377 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 COL8A2P25067 703 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 APEX1P27695 318 aaKnown RBP15.43■□□□□ 0.06
HMGN1-219ENST00000491183 IL2RGP31785 369 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 NUDT2P50583 147 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 UCP2P55851 309 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 ERVS71-1P61550 626 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 CD47Q08722 323 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 TAF11Q15544 211 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 TRIP10Q15642 601 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 SGCAQ16586 387 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 FAM166AQ6J272 317 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 RGS7BPQ6MZT1 257 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-219ENST00000491183 FKBP9P1Q75LS8 142 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 RNF113BQ8IZP6 322 aaKnown RBP15.43■□□□□ 0.06
HMGN1-219ENST00000491183 ACOT11Q8WXI4 607 aaPredicted RBP15.43■□□□□ 0.06
HMGN1-219ENST00000491183 HSH2DQ96JZ2 352 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 TSPAN32Q96QS1 320 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 ALG12Q9BV10 488 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 C1orf198Q9H425 327 aa15.43■□□□□ 0.06
HMGN1-219ENST00000491183 IQCMA0A1B0GVH7 501 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 SLC22A23A1A5C7 686 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 EFCAB9A8MZ26 197 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 ZNF250P15622 560 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 ZNF32P17041 273 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 PLP2Q04941 152 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 TBC1D28Q2M2D7 210 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 PABPC1L2AQ5JQF8 200 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 FAM27BQ5VT28 67 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 MBOAT2Q6ZWT7 520 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 OAFQ86UD1 273 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 OR1J2Q8NGS2 313 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 OR13C2Q8NGS9 318 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 ZNF519Q8TB69 540 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 CHODLQ9H9P2 273 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 ABCD2Q9UBJ2 740 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 KCNS2Q9ULS6 477 aa15.42■□□□□ 0.06
HMGN1-219ENST00000491183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.42■□□□□ 0.064e-11■■■■□ 23.5
HMGN1-219ENST00000491183 ATRQ13535 2644 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 IGLV3-9A0A075B6K5 115 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 A0A1W2PPW3 197 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 CDC42EP2O14613 210 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 TGFAP01135 160 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 ZNF26P17031 533 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-219ENST00000491183 CHN2P52757 468 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 PSME3P61289 254 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 PSG4Q00888 419 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 ALKBH6Q3KRA9 238 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 THEM4Q5T1C6 240 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 ZNF730Q6ZMV8 503 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 IL17RELQ6ZVW7 336 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 TMPRSS11FQ6ZWK6 438 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 AKR7LQ8NHP1 331 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 SYNPRQ8TBG9 265 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 YIPF5Q969M3 257 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 FAM162AQ96A26 154 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 RBP7Q96R05 134 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 SNX18Q96RF0 628 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 KCTD14Q9BQ13 255 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-219ENST00000491183 SHARPINQ9H0F6 387 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 KCNN2Q9H2S1 579 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 NMNAT1Q9HAN9 279 aaPredicted RBP15.41■□□□□ 0.06
HMGN1-219ENST00000491183 CCNB1IP1Q9NPC3 277 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 TAAR3PQ9P1P4 343 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 LPAR3Q9UBY5 353 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 EGFL7Q9UHF1 273 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 ENPP4Q9Y6X5 453 aa15.41■□□□□ 0.06
HMGN1-219ENST00000491183 LOC100509620A0A075B734 347 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 NDUFAB1O14561 156 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 ATP8B1O43520 1251 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 NCR1O76036 304 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 LCKP06239 509 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 LAP3P28838 519 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 APLNRP35414 380 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 RAD52P43351 418 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 MAGEB1P43366 347 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 GPR4P46093 362 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 SLC9A3P48764 834 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 ERVK-25P63136 954 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 HSF2Q03933 536 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 ANKDD1AQ495B1 522 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 FAM120AOSQ5T036 256 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 FOXL2NBQ6ZUU3 175 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 SLC7A13Q8TCU3 470 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 C11orf40Q8WZ69 217 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 RDH5Q92781 318 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 HPS1Q92902 700 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms