RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 OR9K2Q8NGE7 335 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 OR2V1Q8NHB1 315 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 TBC1D15Q8TC07 691 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 SLC25A44Q96H78 314 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-219ENST00000491128 ADGRG7Q96K78 797 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 JAM3Q9BX67 310 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 TRIM36Q9NQ86 728 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 SSR3Q9UNL2 185 aa12.38□□□□□ -0.43
SMPD4-219ENST00000491128 NCR1O76036 304 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 RAC3P60763 192 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 GLO1Q04760 184 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 RDH10Q8IZV5 341 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 GHSRQ92847 366 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 MCHR2Q969V1 340 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 KCNS3Q9BQ31 491 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 GTF2A1LQ9UNN4 478 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 PCDHGB7Q9Y5F8 929 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 TNRC6AQ8NDV7 1962 aaKnown RBP12.37□□□□□ -0.43
SMPD4-219ENST00000491128 A6NIZ1 184 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 ZNF670-ZNF695F2Z2N8 137 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 GLSO94925 669 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-219ENST00000491128 CDRT1O95170 752 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 IGHG1P01857 330 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 HPNP05981 417 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 ALOX5APP20292 161 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 RAP1BP61224 184 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 RAP1AP62834 184 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 MADCAM1Q13477 382 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 CDONQ4KMG0 1287 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 LIPNQ5VXI9 398 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 TMEM91Q6ZNR0 172 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 ESPNLQ6ZVH7 1005 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 SYT9Q86SS6 491 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 RBP7Q96R05 134 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 GALNT8Q9NY28 637 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 RELNP78509 3460 aa12.37□□□□□ -0.43
SMPD4-219ENST00000491128 GJE1A6NN92 205 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 GABRPO00591 440 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 CRABP1P29762 137 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 GABRA5P31644 462 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 SDC2P34741 201 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 ENTPD1P49961 510 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 CLDN18P56856 261 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 EIF2B1Q14232 305 aaKnown RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 SLC10A1Q14973 349 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 OR7E24Q6IFN5 339 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 ZFP62Q8NB50 900 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 NOXO1Q8NFA2 376 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 OR6N1Q8NGY5 312 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 SNIP1Q8TAD8 396 aaKnown RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 FNDC9Q8TBE3 224 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 C11orf40Q8WZ69 217 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 RNF166Q96A37 237 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 SLIRPQ9GZT3 109 aaKnown RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 C6orf62Q9GZU0 229 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 INPP5EQ9NRR6 644 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 ST6GALNAC2Q9UJ37 374 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 WASF3Q9UPY6 502 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 TRBV2A0A0J9YWF9 115 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 ANKRD61A6NGH8 418 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 EIF1BO60739 113 aaKnown RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 AQP8O94778 261 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 FKBP2P26885 142 aaKnown RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 SIRPAP78324 504 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 USP43Q70EL4 1123 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 SLC26A10Q8NG04 563 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 OTOSQ8NHW6 89 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 ABTB1Q969K4 478 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 SCMH1Q96GD3 660 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 BARHL1Q9BZE3 327 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 BRD7Q9NPI1 651 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 FBXL3Q9UKT7 428 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 N6AMT1Q9Y5N5 214 aa12.36□□□□□ -0.43
SMPD4-219ENST00000491128 RP1L1Q8IWN7 2480 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-219ENST00000491128 SMG1Q96Q15 3661 aaKnown RBP12.35□□□□□ -0.43
SMPD4-219ENST00000491128 DCXRQ7Z4W1 244 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 OR6X1Q8NH79 312 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 PGLYRP3Q96LB9 341 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 OR2M2Q96R28 347 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 NAA11Q9BSU3 229 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-219ENST00000491128 ABHD6Q9BV23 337 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 FANCFQ9NPI8 374 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 CENPMQ9NSP4 180 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 SPRR3Q9UBC9 169 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 RASD1Q9Y272 281 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 CLPXO76031 633 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 ZNF823P16415 610 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 BMXP51813 675 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 AGFG1P52594 562 aaKnown RBP12.35□□□□□ -0.43
SMPD4-219ENST00000491128 HSF2Q03933 536 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 ZNF239Q16600 458 aaKnown RBP12.35□□□□□ -0.43
SMPD4-219ENST00000491128 TIMM50Q3ZCQ8 353 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 ZNF684Q5T5D7 378 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 BTLAQ7Z6A9 289 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 SLC22A16Q86VW1 577 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 LRRC18Q8N456 261 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 TMEM178AQ8NBL3 297 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 ADPRHL1Q8NDY3 354 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 ALKBH3Q96Q83 286 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms