RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 LDAHQ9H6V9 325 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 FGF22Q9HCT0 170 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 KCNG2Q9UJ96 466 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 VDAC3Q9Y277 283 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF831Q5JPB2 1677 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 LTBP1Q14766 1721 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 NYNRINQ9P2P1 1898 aaKnown RBP11.71□□□□□ -0.53
SHOX2-205ENST00000490689 SERINC4A6NH21 518 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 EFCAB7A8K855 629 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 PHYHO14832 338 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 OR2F2O95006 317 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 ATP1B3P54709 279 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 BAMBIQ13145 260 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 OR2F1Q13607 317 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 PLEKHN1Q494U1 663 aaPredicted RBP11.71□□□□□ -0.53
SHOX2-205ENST00000490689 MANEAQ5SRI9 462 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 DCAF12L2Q5VW00 463 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 PWWP2BQ6NUJ5 590 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 SLC16A9Q7RTY1 509 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 OR2G2Q8NGZ5 317 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 FGGYQ96C11 551 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 WDR34Q96EX3 536 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 NUDT22Q9BRQ3 303 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 DUSP22Q9NRW4 184 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 RBMXL2O75526 392 aaKnown RBP11.71□□□□□ -0.54
SHOX2-205ENST00000490689 IL5P05113 134 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 SHISA6Q6ZSJ9 500 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 ABHD12BQ7Z5M8 362 aaPredicted RBP11.71□□□□□ -0.54
SHOX2-205ENST00000490689 NAA40Q86UY6 237 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 NR2C2APQ86WQ0 139 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 OR51T1Q8NGJ9 327 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 OR6N1Q8NGY5 312 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 C2orf42Q9NWW7 574 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 TBC1D29Q9UFV1 150 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 ACAD8Q9UKU7 415 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 URGCP-MRPS24S4R325 110 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 LCTP09848 1927 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 TNFP01375 233 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 SLC2A1P11166 492 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 GALP22466 123 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 TMEM225Q6GV28 225 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 OR52W1Q6IF63 320 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 OR5M9Q8NGP3 310 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 OR14K1Q8NGZ2 314 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 CCL4L1Q8NHW4 92 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 KLRF1Q9NZS2 232 aa11.71□□□□□ -0.54
SHOX2-205ENST00000490689 TP53BP1Q12888 1972 aaPredicted RBP11.7□□□□□ -0.54
SHOX2-205ENST00000490689 RFPL4AA6NLU0 287 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 RFPL4AL1F8VTS6 287 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 XRCC3O43542 346 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 GLSO94925 669 aaPredicted RBP11.7□□□□□ -0.54
SHOX2-205ENST00000490689 HLA-DQB1P01920 261 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 HOXD4P09016 255 aaPredicted RBP11.7□□□□□ -0.54
SHOX2-205ENST00000490689 FOSL2P15408 326 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 C5AR1P21730 350 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 SNU13P55769 128 aaKnown RBP11.7□□□□□ -0.54
SHOX2-205ENST00000490689 PMPCAQ10713 525 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 RUNX3Q13761 415 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 WBP2NLQ6ICG8 309 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 TMEM184AQ6ZMB5 413 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 SPICQ8N5J4 248 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 TGM7Q96PF1 710 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 MRPS18AQ9NVS2 196 aaKnown RBP11.7□□□□□ -0.54
SHOX2-205ENST00000490689 EHFQ9NZC4 300 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF230Q9UIE0 474 aaPredicted RBP11.7□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF223Q9UK11 482 aaPredicted RBP11.7□□□□□ -0.54
SHOX2-205ENST00000490689 H0Y8X5 98 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 TRIM77I1YAP6 450 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 SULT1C2O00338 296 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 ADAMTSL4Q6UY14 1074 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF704Q6ZNC4 412 aaPredicted RBP11.7□□□□□ -0.54
SHOX2-205ENST00000490689 BAP18Q8IXM2 172 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 HSD17B11Q8NBQ5 300 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 OR4D10Q8NGI6 311 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 SLC22A8Q8TCC7 542 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 TCEAL2Q9H3H9 227 aaPredicted RBP11.7□□□□□ -0.54
SHOX2-205ENST00000490689 SMCO4Q9NRQ5 59 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 NDRG3Q9UGV2 375 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 ANKRD20A5PA0PJZ0 165 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 PRSS38A1L453 326 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 IMPA2O14732 288 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 PSMB6P28072 239 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF440Q8IYI8 595 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 FRMD1Q8N878 549 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 FNDC9Q8TBE3 224 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 FAM174AQ8TBP5 190 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF304Q9HCX3 659 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 ZFP57Q9NU63 452 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 MTFP1Q9UDX5 166 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 SCN4AP35499 1836 aa11.7□□□□□ -0.54
SHOX2-205ENST00000490689 K7EPK0 472 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 SDCBPO00560 298 aaPredicted RBP11.69□□□□□ -0.54
SHOX2-205ENST00000490689 BHLHE40O14503 412 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 PGCP20142 388 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 KCNJ3P48549 501 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 DHRS2Q13268 280 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 KIR2DS3Q14952 304 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 ELOCQ15369 112 aa11.69□□□□□ -0.54
SHOX2-205ENST00000490689 CORO6Q6QEF8 472 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms