RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-210ENST00000490668 VDAC3Q9Y277 283 aa3.88□□□□□ -1.79
SFPQ-210ENST00000490668 IFT52Q9Y366 437 aa3.88□□□□□ -1.79
SFPQ-210ENST00000490668 L3MBTL1Q9Y468 752 aa3.88□□□□□ -1.79
SFPQ-210ENST00000490668 KCNE3Q9Y6H6 103 aa3.88□□□□□ -1.79
SFPQ-210ENST00000490668 CELSR3Q9NYQ7 3312 aa3.88□□□□□ -1.79
SFPQ-210ENST00000490668 CACNA1GO43497 2377 aa3.88□□□□□ -1.79
SFPQ-210ENST00000490668 MED13Q9UHV7 2174 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 EXPH5Q8NEV8 1989 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ASPMQ8IZT6 3477 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 WDFY3Q8IZQ1 3526 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 IGLV3-32A0A0A0MS00 114 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 TRGV8A0A0C4DH27 118 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 CENPVL1A0A0U1RR11 272 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 A0A1B0GUH1 482 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 A0A1W2PPK0 400 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 PRORSD1PA6NEY8 169 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ANKRD61A6NGH8 418 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 GJE1A6NN92 205 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 C17orf51A8MQB3 221 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 HNRNPCL2B2RXH8 293 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 NPIPA2E9PIF3 369 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 NPIPB9F8W1W9 429 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 NPIPA3F8WFD2 350 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 XRCC3O43542 346 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 EIF4E2O60573 245 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 FCMRO60667 390 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 WDR1O75083 606 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 SERPINB7O75635 380 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ACTL6AO96019 429 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 C1QCP02747 245 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 PABPC4LP0CB38 370 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ETS2P15036 469 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 CD1EP15812 388 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 PGCP20142 388 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 RPS4Y1P22090 263 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 GNLYP22749 145 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ME2P23368 584 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ELK4P28324 431 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 AQP1P29972 269 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 EIF1P41567 113 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 UQCRFS1P47985 274 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 NPBWR1P48145 328 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 SLC7A2P52569 658 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 GAS1P54826 345 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 FOXF1Q12946 379 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 SELENBP1Q13228 472 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 SKP2Q13309 424 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 SELPLGQ14242 412 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 SF3B4Q15427 424 aaKnown RBP eCLIP3.87□□□□□ -1.792e-7■■■■□ 23.2
SFPQ-210ENST00000490668 STK11Q15831 433 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 VMACQ2NL98 169 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 NDUFAF6Q330K2 333 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ANKRD55Q3KP44 614 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ZNF311Q5JNZ3 666 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 MRPL2Q5T653 305 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 WLSQ5T9L3 541 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 NANOGP8Q6NSW7 305 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 REEP3Q6NUK4 255 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 C3orf33Q6P1S2 294 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 HACD2Q6Y1H2 254 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ZNF836Q6ZNA1 936 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 EIF3MQ7L2H7 374 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 OLIG3Q7RTU3 272 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ZNF550Q7Z398 422 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 NET1Q7Z628 596 aaPredicted RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 HMGN2P46Q86SG4 172 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 PATL1Q86TB9 770 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 YRDCQ86U90 279 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 CCDC190Q86UF4 302 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ZNF440Q8IYI8 595 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 PGAM4Q8N0Y7 254 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ZNF611Q8N823 705 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 FAM83FQ8NEG4 500 aaPredicted RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 BHLHE22Q8NFJ8 381 aaPredicted RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 OR2T12Q8NG77 320 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 OR2M3Q8NG83 312 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 OR1J2Q8NGS2 313 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 OR52P1PQ8NH57 321 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 OR5W2Q8NH69 310 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 OR10A6Q8NH74 314 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 NEIL3Q8TAT5 605 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 FAM57AQ8TBR7 257 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 SLC26A7Q8TE54 656 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 RASSF5Q8WWW0 418 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 TMEM234Q8WY98 164 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 SMPDL3BQ92485 455 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 MOB3AQ96BX8 217 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 RNF183Q96D59 192 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 GNRHR2Q96P88 292 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 HOPXQ9BPY8 73 aaPredicted RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 KCTD14Q9BQ13 255 aaPredicted RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 DSN1Q9H410 356 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 ESRP2Q9H6T0 727 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 KAT8Q9H7Z6 458 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 NANOGQ9H9S0 305 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 BCL2L10Q9HD36 194 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 HINT3Q9NQE9 182 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 EXOSC3Q9NQT5 275 aaKnown RBP3.87□□□□□ -1.79
SFPQ-210ENST00000490668 KLHL28Q9NXS3 571 aa3.87□□□□□ -1.79
SFPQ-210ENST00000490668 MED11Q9P086 117 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms