RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 HDDC2Q7Z4H3 204 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 NOXO1Q8NFA2 376 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 OR4F6Q8NGB9 312 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 LKAAEAR1Q8TD35 194 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 ABHD3Q8WU67 409 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 CREB3L1Q96BA8 519 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 FAM3DQ96BQ1 224 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 TM4SF18Q96CE8 201 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 GON7Q9BXV9 100 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 VCX2Q9H322 139 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 SYNDIG1Q9H7V2 258 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 FN3KRPQ9HA64 309 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 WFDC1Q9HC57 220 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 HMG20AQ9NP66 347 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 ZNF639Q9UID6 485 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 BLOC1S6Q9UL45 172 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 N6AMT1Q9Y5N5 214 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 PEX16Q9Y5Y5 336 aa2.53□□□□□ -2
CCDC39-206ENST00000489868 DDX49Q9Y6V7 483 aaKnown RBP2.53□□□□□ -2
CCDC39-206ENST00000489868 C15orf38-AP3S2A0A0A6YYH1 394 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 BTBD17A6NE02 478 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 F6UB75 175 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 RRP8O43159 456 aaKnown RBP2.52□□□□□ -2.01
CCDC39-206ENST00000489868 ERLIN2O94905 339 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 SLC25A14O95258 325 aaPredicted RBP2.52□□□□□ -2.01
CCDC39-206ENST00000489868 GLRA2P23416 452 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 CDH4P55283 916 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 CDC20Q12834 499 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 PRPSAP1Q14558 356 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 PON2Q15165 354 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 PRMT9Q6P2P2 845 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 PEX26Q7Z412 305 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 TMEM135Q86UB9 458 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 NPY6RQ99463 290 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 CCT7Q99832 543 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 RNF5Q99942 180 aa2.52□□□□□ -2.01
CCDC39-206ENST00000489868 ADAMTS13Q76LX8 1427 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 DOCK8Q8NF50 2099 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 GCM2O75603 506 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-206ENST00000489868 IL1BP01584 269 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 HLA-DPB1P04440 258 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 CT62P0C5K7 136 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 POLR2MP0CAP2 368 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 CEACAM6P40199 344 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 EPS15P42566 896 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 AIF1P55008 147 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 RGNQ15493 299 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 FAM78AQ5JUQ0 283 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 LRRC74BQ6ZQY2 392 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 GPATCH11Q8N954 259 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 NECAP1Q8NC96 275 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 OR10R2Q8NGX6 335 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 SLC25A2Q9BXI2 301 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 SAV1Q9H4B6 383 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-206ENST00000489868 CWH43Q9H720 699 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 GPATCH2LQ9NWQ4 482 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 SLC7A8Q9UHI5 535 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 PTPRTO14522 1441 aa2.51□□□□□ -2.01
CCDC39-206ENST00000489868 IGLV1-50A0A075B6I6 118 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 IGLV3-12A0A075B6K2 115 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 TMEM50AO95807 157 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 AIFM1O95831 613 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 GPX6P59796 221 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 ZNF816Q0VGE8 651 aaPredicted RBP2.5□□□□□ -2.01
CCDC39-206ENST00000489868 IL24Q13007 206 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 GPM6BQ13491 265 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 SAXO2Q658L1 398 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 OR8J1Q8NGP2 316 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 C15orf40Q8WUR7 153 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 L3HYPDHQ96EM0 354 aa2.5□□□□□ -2.01
CCDC39-206ENST00000489868 NARS2Q96I59 477 aaKnown RBP2.5□□□□□ -2.01
CCDC39-206ENST00000489868 A0A0U1RQV1 116 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 RAB3DO95716 219 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 FGGP02679 453 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 KITLGP21583 273 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 CX3CR1P49238 355 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 SLC11A1P49279 550 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 ARG2P78540 354 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 RABL6Q3YEC7 729 aaPredicted RBP2.49□□□□□ -2.01
CCDC39-206ENST00000489868 ANKRD22Q5VYY1 191 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 ARL9Q6T311 187 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 PLET1Q6UQ28 207 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 FBXW12Q6X9E4 464 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 OAFQ86UD1 273 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 KRTAP13-1Q8IUC0 172 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 MMAAQ8IVH4 418 aaKnown RBP2.49□□□□□ -2.01
CCDC39-206ENST00000489868 TEX9Q8N6V9 391 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 PIK3IP1Q96FE7 263 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 ZNF382Q96SR6 550 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 ROPN1BQ9BZX4 212 aaPredicted RBP2.49□□□□□ -2.01
CCDC39-206ENST00000489868 NT5MQ9NPB1 228 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 S4R3C0 116 aa2.49□□□□□ -2.01
CCDC39-206ENST00000489868 PSTPIP1O43586 416 aa2.48□□□□□ -2.01
CCDC39-206ENST00000489868 AQP2P41181 271 aa2.48□□□□□ -2.01
CCDC39-206ENST00000489868 KIR3DL2P43630 455 aa2.48□□□□□ -2.01
CCDC39-206ENST00000489868 SMUG1Q53HV7 270 aa2.48□□□□□ -2.01
CCDC39-206ENST00000489868 C6orf226Q5I0X4 101 aa2.48□□□□□ -2.01
CCDC39-206ENST00000489868 BHLHA15Q7RTS1 189 aaPredicted RBP2.48□□□□□ -2.01
CCDC39-206ENST00000489868 OR10J6PQ8NGY7 276 aa2.48□□□□□ -2.01
CCDC39-206ENST00000489868 SGK2Q9HBY8 427 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms