RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ZNF773Q6PK81 442 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 CASP12Q6UXS9 341 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 DPY19L2P2Q6ZN68 376 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 GPR141Q7Z602 305 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF433Q8N7K0 673 aaPredicted RBP9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF611Q8N823 705 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 WFDC11Q8NEX6 87 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF519Q8TB69 540 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 IPCEF1Q8WWN9 437 aaPredicted RBP9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 UBE2FQ969M7 185 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 TMEM45BQ96B21 275 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 TSC22D3Q99576 134 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 KATNB1Q9BVA0 655 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 TBC1D23Q9NUY8 699 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 TAS2R16Q9NYV7 291 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 PCDHGB5Q9Y5G0 923 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 FLVCR1Q9Y5Y0 555 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 MED13LQ71F56 2210 aa9.27□□□□□ -0.93
SCAMP4-208ENST00000489554 CIB4A0PJX0 185 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 CCDC160A6NGH7 325 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 OR5H1A6NKK0 313 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 IMPA2O14732 288 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 VAMP5O95183 116 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 PLAUP00749 431 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 IGHV3-9P01782 118 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 APEHP13798 732 aaKnown RBP9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC6A6P31641 620 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 GRK5P34947 590 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 ALDH3B2P48448 385 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 CTXN1P60606 82 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 CDC42P60953 191 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 ISL1P61371 349 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 ERVK-25P63136 954 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 RUNX1T1Q06455 604 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 DBPQ10586 325 aaPredicted RBP9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 MESTQ5EB52 335 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 C1QTNF12Q5T7M4 302 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 OR7E24Q6IFN5 339 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC27A4Q6P1M0 643 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 PRSS57Q6UWY2 283 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 SEZ6L2Q6UXD5 910 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 PTCHD4Q6ZW05 846 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 CREB3L2Q70SY1 520 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 PXKQ7Z7A4 578 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 KRTAP1-3Q8IUG1 177 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 SVOPQ8N4V2 548 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 OR2T33Q8NG76 320 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 OR9K2Q8NGE7 335 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF420Q8TAQ5 688 aaPredicted RBP9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 TEX47Q8TBZ9 253 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 FBLIM1Q8WUP2 373 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 TMEM171Q8WVE6 324 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 AKAP1Q92667 903 aaKnown RBP eCLIP9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 TXNDC15Q96J42 360 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 Q96M85 177 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 OXGR1Q96P68 337 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF385AQ96PM9 386 aaKnown RBP9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 IFT27Q9BW83 186 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 TEX12Q9BXU0 123 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 GSX2Q9BZM3 304 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 TXNIPQ9H3M7 391 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 DLL4Q9NR61 685 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 INIPQ9NRY2 104 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 MED29Q9NX70 200 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 UPB1Q9UBR1 384 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 AASSQ9UDR5 926 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF346Q9UL40 294 aaKnown RBP9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 RASD1Q9Y272 281 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 IER3IP1Q9Y5U9 82 aa9.26□□□□□ -0.93
SCAMP4-208ENST00000489554 TEX13CA0A0J9YWL9 993 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 SURF4O15260 269 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 RNF13O43567 381 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 PRKYO43930 277 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 RAD51DO75771 328 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF432O94892 652 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 HIST1H2ABP04908 130 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 PAX1P15863 534 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 HIST1H1CP16403 213 aaKnown RBP9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 JUNBP17275 347 aaPredicted RBP9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 CRHBPP24387 322 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 GTF2E2P29084 291 aaKnown RBP9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 SDHAP31040 664 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 POU3F1Q03052 451 aaPredicted RBP9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 TGFBR3Q03167 851 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 MVKQ03426 396 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 BSPH1Q075Z2 132 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 FAPQ12884 760 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 CDK5R2Q13319 367 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 MELKQ14680 651 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 Q5PR19 223 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 TMEM225Q6GV28 225 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 HIST3H2AQ7L7L0 130 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 ABHD12BQ7Z5M8 362 aaPredicted RBP9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 ENTHD1Q8IYW4 607 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 C17orf78Q8N4C9 275 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 POMGNT2Q8NAT1 580 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 C1orf162Q8NEQ5 155 aaPredicted RBP9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 ANKK1Q8NFD2 765 aa9.25□□□□□ -0.93
SCAMP4-208ENST00000489554 OR52L1Q8NGH7 329 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms