RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 VSX1Q9NZR4 365 aaPredicted RBP12.57□□□□□ -0.4
HLA-F-229ENST00000489502 RNF115Q9Y4L5 304 aa12.57□□□□□ -0.4
HLA-F-229ENST00000489502 DCTN6O00399 190 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 ABCD4O14678 606 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 SLC16A7O60669 478 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 GPANK1O95872 356 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 CD3EP07766 207 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 OR8G3PP0DMU2 310 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 NR1H2P55055 460 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 PIGFQ07326 219 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 COX10Q12887 443 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 ZNF704Q6ZNC4 412 aaPredicted RBP12.56□□□□□ -0.4
HLA-F-229ENST00000489502 ZDHHC13Q8IUH4 622 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 SVOPLQ8N434 492 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 LNX2Q8N448 690 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 LRRC18Q8N456 261 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 OR2T33Q8NG76 320 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 OR52E2Q8NGJ4 325 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 FNDC8Q8TC99 324 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 NANOS1Q8WY41 292 aaKnown RBP12.56□□□□□ -0.4
HLA-F-229ENST00000489502 NEUROG1Q92886 237 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 LURAP1Q96LR2 239 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 NUAK2Q9H093 628 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 EMC7Q9NPA0 242 aa12.56□□□□□ -0.4
HLA-F-229ENST00000489502 RPRD1BQ9NQG5 326 aaKnown RBP12.56□□□□□ -0.4
HLA-F-229ENST00000489502 PAPOLBQ9NRJ5 636 aaKnown RBP12.56□□□□□ -0.4
HLA-F-229ENST00000489502 CCDC168Q8NDH2 2452 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 HEATR1Q9H583 2144 aaKnown RBP12.55□□□□□ -0.4
HLA-F-229ENST00000489502 RAI1Q7Z5J4 1906 aaPredicted RBP12.55□□□□□ -0.4
HLA-F-229ENST00000489502 IGHV1-18A0A0C4DH31 117 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 OR6C68A6NDL8 312 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 IDH3BO43837 385 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 FARS2O95363 451 aaKnown RBP12.55□□□□□ -0.4
HLA-F-229ENST00000489502 RENP00797 406 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 CECR9P0C854 216 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 OSMP13725 252 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 CD40P25942 277 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 GIPRP48546 466 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 PTDSS1P48651 473 aaKnown RBP12.55□□□□□ -0.4
HLA-F-229ENST00000489502 MRPS34P82930 218 aaKnown RBP12.55□□□□□ -0.4
HLA-F-229ENST00000489502 CRMP1Q14194 572 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 SGCAQ16586 387 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 GSG1Q2KHT4 349 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 TMEM108Q6UXF1 575 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 FOXL2NBQ6ZUU3 175 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 SSX8Q7RTT4 187 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.55□□□□□ -0.4
HLA-F-229ENST00000489502 PIAS4Q8N2W9 510 aaPredicted RBP12.55□□□□□ -0.4
HLA-F-229ENST00000489502 OR9Q1Q8NGQ5 310 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 STMN2Q93045 179 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 SLC38A2Q96QD8 506 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 TMEM204Q9BSN7 226 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 LIME1Q9H400 295 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 UBTD1Q9HAC8 227 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 KRT84Q9NSB2 600 aa12.55□□□□□ -0.4
HLA-F-229ENST00000489502 COA3Q9Y2R0 106 aaPredicted RBP12.55□□□□□ -0.4
HLA-F-229ENST00000489502 TEX15Q9BXT5 2789 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 IGLV1-36A0A0B4J1U3 117 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 ATP6V1G2-DDX39BF2Z307 99 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 AHCYL1O43865 530 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 KHDRBS3O75525 346 aaKnown RBP12.54□□□□□ -0.4
HLA-F-229ENST00000489502 UBL3O95164 117 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 RAB36O95755 333 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 IGLV1-44P01699 117 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 SCG5P05408 212 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 HOXB1P14653 301 aaPredicted RBP12.54□□□□□ -0.4
HLA-F-229ENST00000489502 IGFBP5P24593 272 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 LAP3P28838 519 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 CENPAP49450 140 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 CDH11P55287 796 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 GINS1Q14691 196 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 TMEM236Q5W0B7 351 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 UGT2A3Q6UWM9 527 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 B3GLCTQ6Y288 498 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 SLC16A14Q7RTX9 510 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 PQLC1Q8N2U9 271 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 SLC37A3Q8NCC5 494 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 NPEPL1Q8NDH3 523 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 DNAJC9Q8WXX5 260 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 CIB1Q99828 191 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 PLEKHF2Q9H8W4 249 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 POLE4Q9NR33 117 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 B3GNT2Q9NY97 397 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 CRNNQ9UBG3 495 aaPredicted RBP12.54□□□□□ -0.4
HLA-F-229ENST00000489502 TMEFF2Q9UIK5 374 aaPredicted RBP12.54□□□□□ -0.4
HLA-F-229ENST00000489502 BAIAP2Q9UQB8 552 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 CSMD2Q7Z408 3487 aa12.54□□□□□ -0.4
HLA-F-229ENST00000489502 PDZD2O15018 2839 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 RIIAD1A6NNX1 92 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 FAM171A2A8MVW0 826 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 SHISA9B4DS77 424 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 EI24O14681 340 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 MPZL1O95297 269 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 IGKV3-15P01624 115 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 GAAP10253 952 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 CBR1P16152 277 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 MSR1P21757 451 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 PTAFRP25105 342 aa12.53□□□□□ -0.4
HLA-F-229ENST00000489502 EPHA2P29317 976 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms