RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 IGHV3-9P01782 118 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 TRHRP34981 398 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-209ENST00000489180 PRTGQ2VWP7 1150 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 BHLHE23Q8NDY6 225 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 PHOSPHO2Q8TCD6 241 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 SDF2Q99470 211 aa16.15■□□□□ 0.18
NPHP4-209ENST00000489180 PCYT1BQ9Y5K3 369 aaPredicted RBP16.15■□□□□ 0.18
NPHP4-209ENST00000489180 PRKNO60260 465 aaPredicted RBP16.14■□□□□ 0.18
NPHP4-209ENST00000489180 CLN5O75503 358 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 HBE1P02100 147 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 TEKQ02763 1124 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 LINC00696Q6ZRV3 163 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 NAXDQ8IW45 347 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 KCNRGQ8N5I3 272 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 C2CD4CQ8TF44 421 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 MYEOVQ96EZ4 313 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 STACQ99469 402 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 SLCO5A1Q9H2Y9 848 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 TMEM30AQ9NV96 361 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 SPHK1Q9NYA1 384 aa16.14■□□□□ 0.18
NPHP4-209ENST00000489180 GFYI3L273 518 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 BHLHE40O14503 412 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 SBK3P0C264 359 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 F2RL1P55085 397 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 KCNAB1Q14722 419 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 TMEM184BQ9Y519 407 aaPredicted RBP16.14■□□□□ 0.17
NPHP4-209ENST00000489180 GABARAPH6UMI1 98 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF749O43361 778 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 GLI4P10075 376 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 CD46P15529 392 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 RPL27P61353 136 aaKnown RBP16.14■□□□□ 0.17
NPHP4-209ENST00000489180 FABP5Q01469 135 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 FAM26EQ8N5C1 309 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 NAT6Q93015 286 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 SLC25A21Q9BQT8 299 aaPredicted RBP16.14■□□□□ 0.17
NPHP4-209ENST00000489180 FGF22Q9HCT0 170 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 NXPH2O95156 264 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 MYOGP15173 224 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 AADACP22760 399 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 TM4SF4P48230 202 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 TPMTP51580 245 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 ACVR1Q04771 509 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 ARHGAP11BQ3KRB8 267 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 CORO6Q6QEF8 472 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF620Q6ZNG0 422 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 OR1S2Q8NGQ3 325 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 C14orf79Q96F83 325 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 PLK3Q9H4B4 646 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 TBC1D29Q9UFV1 150 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 CSAG2Q9Y5P2 127 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF439Q8NDP4 499 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 OR1E3Q8WZA6 343 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 CDCA4Q9BXL8 241 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 KIR3DX1Q9H7L2 352 aa16.14■□□□□ 0.17
NPHP4-209ENST00000489180 EFSO43281 561 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 FCMRO60667 390 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 SNCAP37840 140 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 OR4N2Q8NGD1 307 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 FBXO8Q9NRD0 319 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 GPR173Q9NS66 373 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 SLC6A12P48065 614 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 PHYHIPQ92561 330 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 BSCL2Q96G97 398 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-209ENST00000489180 OPALINQ96PE5 141 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 NIPSNAP3BQ9BS92 247 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 LAMA4Q16363 1823 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 EPHA2P29317 976 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 RPS27P42677 84 aaKnown RBP16.13■□□□□ 0.17
NPHP4-209ENST00000489180 GPR85P60893 370 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 LPCAT3Q6P1A2 487 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 H1FNTQ75WM6 255 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-209ENST00000489180 FAM122BQ7Z309 247 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 AGBL5Q8NDL9 886 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 HPSE2Q8WWQ2 592 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 C12orf49Q9H741 205 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 PDFQ9HBH1 243 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 DAPP1Q9UN19 280 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 LOC107986453A0A1B0GWG9 222 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 H0Y8G0 127 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 M0R082 166 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 PTBP1P26599 531 aaKnown RBP eCLIP16.13■□□□□ 0.17
NPHP4-209ENST00000489180 DUSP6Q16828 381 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 OR8G2PQ6IF36 304 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 TMEM182Q6ZP80 229 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-209ENST00000489180 PIGQQ9BRB3 760 aa16.13■□□□□ 0.17
NPHP4-209ENST00000489180 UTP23Q9BRU9 249 aaKnown RBP16.13■□□□□ 0.17
NPHP4-209ENST00000489180 STMND1H3BQB6 276 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 NME2P1O60361 137 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 HLA-DOBP13765 273 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 ELLP55199 621 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-209ENST00000489180 P2RX3P56373 397 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 AQP6Q13520 282 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF705AQ6ZN79 300 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-209ENST00000489180 DPPA2Q7Z7J5 298 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 OR51E1Q8TCB6 317 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 LIPHQ8WWY8 451 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 NID1P14543 1247 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 SPI1P17947 270 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 CD1CP29017 333 aa16.12■□□□□ 0.17
NPHP4-209ENST00000489180 C11orf91Q3C1V1 193 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms