RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SELENOVP59797 346 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 CTXN1P60606 82 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 RAP1BP61224 184 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 PSME3P61289 254 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 RAP1AP62834 184 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 HSF2Q03933 536 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 LAPTM4AQ15012 233 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 CHRFAM7AQ494W8 412 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 IQCCQ4KMZ1 466 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 THEM4Q5T1C6 240 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 RGS7BPQ6MZT1 257 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 CCDC121Q6ZUS5 278 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 MBOAT2Q6ZWT7 520 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 LRRC18Q8N456 261 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 FGFBP3Q8TAT2 258 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 HDAC2Q92769 488 aaKnown RBP11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 RBP7Q96R05 134 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 SIAEQ9HAT2 523 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 CCNB1IP1Q9NPC3 277 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 TMEM160Q9NX00 188 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 REV1Q9UBZ9 1251 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 GPR160Q9UJ42 338 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 CDC42EP3Q9UKI2 254 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 SAMD4AQ9UPU9 718 aaKnown RBP11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 SNX13Q9Y5W8 968 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 ENPP4Q9Y6X5 453 aa11.89□□□□□ -0.51
SPTLC1-207ENST00000488921 TRAV27A0A087WT01 109 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 A0A1W2PPW3 197 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 B2RBV5 119 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 FFAR1O14842 300 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 UBOX5O94941 541 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 PRSS23O95084 383 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 STAMBPO95630 424 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 IFNA2P01563 188 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 IGHV4-31P0DP07 118 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 MAKP20794 623 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 GIFP27352 417 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 RAD52P43351 418 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 C16orf89Q6UX73 402 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 ZNF786Q8N393 782 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 FAM156AQ8NDB6 213 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 OR51A7Q8NH64 312 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 UBASH3BQ8TF42 649 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 NMD3Q96D46 503 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 FOXN4Q96NZ1 517 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 SYT3Q9BQG1 590 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 BCL2L14Q9BZR8 327 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 BPESC1Q9GZL8 116 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 TPK1Q9H3S4 243 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 KRCC1Q9NPI7 259 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 LPAR3Q9UBY5 353 aa11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 FAM32AQ9Y421 112 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-207ENST00000488921 SONP18583 2426 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 A0A087WUU8 490 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 MMP7P09237 267 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 NCK1P16333 377 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 ZNF23P17027 643 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 CHN2P52757 468 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 FMODQ06828 376 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 GLYATQ6IB77 296 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 FAM166AQ6J272 317 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 PODNL1Q6PEZ8 512 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 SLC25A47Q6Q0C1 308 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 UNQ6126/PRO20091Q6UXV3 157 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 TMPRSS11FQ6ZWK6 438 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 ZCCHC24Q8N2G6 241 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 OR13C2Q8NGS9 318 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 ZNF519Q8TB69 540 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 SNX33Q8WV41 574 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 NSMAFQ92636 917 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 NABP1Q96AH0 204 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 TSPAN32Q96QS1 320 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 NMNAT1Q9HAN9 279 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 ADA2Q9NZK5 511 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 EGFL7Q9UHF1 273 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 DUSP13Q9UII6 198 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 KCNS2Q9ULS6 477 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 UGT2A1Q9Y4X1 527 aa11.87□□□□□ -0.51
SPTLC1-207ENST00000488921 IGHV4-61A0A0C4DH41 118 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 A0A1W2PRQ8 180 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 KIAA1324LA8MWY0 1029 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 XKRYO14609 159 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 LCKP06239 509 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 H1F0P07305 194 aaKnown RBP11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 FAM157BP0CG42 384 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 ZNF32P17041 273 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 RHCEP18577 417 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 CDAP32320 146 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 RPL4P36578 427 aaKnown RBP11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 ALDH3B1P43353 468 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 GPR4P46093 362 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 KLF3P57682 345 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 PCBD1P61457 104 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 DGCR6Q14129 220 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 SGCAQ16586 387 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 NKPD1Q17RQ9 610 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 MSMPQ1L6U9 139 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 ZBED5Q49AG3 693 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 PABPC1L2AQ5JQF8 200 aa11.86□□□□□ -0.51
SPTLC1-207ENST00000488921 FGD3Q5JSP0 725 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms