RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 A1L4Q6 167 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 TUBAL3A6NHL2 446 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 PRR23D1E9PI22 279 aaPredicted RBP9.04□□□□□ -0.96
SKA1-204ENST00000488454 CASKO14936 926 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 SURF4O15260 269 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 RAD51DO75771 328 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 SLC2A10O95528 541 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 SNAP29O95721 258 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 ITGA5P08648 1049 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 PRR23D2P0DMB1 279 aaPredicted RBP9.04□□□□□ -0.96
SKA1-204ENST00000488454 NPR2P20594 1047 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 COX5AP20674 150 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 POLR2IP36954 125 aaKnown RBP9.04□□□□□ -0.96
SKA1-204ENST00000488454 FOXG1P55316 489 aaPredicted RBP9.04□□□□□ -0.96
SKA1-204ENST00000488454 CDC42P60953 191 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 UBE2NP61088 152 aaKnown RBP9.04□□□□□ -0.96
SKA1-204ENST00000488454 FMODQ06828 376 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 TFF3Q07654 80 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 CRMP1Q14194 572 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 TSC22D1Q15714 1073 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 SGCAQ16586 387 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 C10orf128Q5T292 105 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 SLX4IPQ5VYV7 408 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 SLC25A47Q6Q0C1 308 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 ZNF813Q6ZN06 617 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 PTCHD4Q6ZW05 846 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 LINGO2Q7L985 606 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 SSX8Q7RTT4 187 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 GLB1L2Q8IW92 636 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 CCDC36Q8IYA8 594 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 C17orf78Q8N4C9 275 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 CYB561A3Q8NBI2 242 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 NPEPL1Q8NDH3 523 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 OR1K1Q8NGR3 316 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 OR2T4Q8NH00 348 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 HSD17B8Q92506 261 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 S100PBPQ96BU1 408 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 MUS81Q96NY9 551 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 MED18Q9BUE0 208 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 ACTR6Q9GZN1 396 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 NUAK2Q9H093 628 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 RPRD1BQ9NQG5 326 aaKnown RBP9.04□□□□□ -0.96
SKA1-204ENST00000488454 IMPAD1Q9NX62 359 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 B9D1Q9UPM9 204 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 FKBP7Q9Y680 259 aa9.04□□□□□ -0.96
SKA1-204ENST00000488454 HIVEP3Q5T1R4 2406 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 A0A096LPE4 126 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 LOC100130705A0A1B0GUX0 176 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 A0A1W2PPL8 197 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 A0A1W2PPZ6 126 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 OR6C68A6NDL8 312 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 OR5H1A6NKK0 313 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 TLX2O43763 284 aaPredicted RBP9.03□□□□□ -0.96
SKA1-204ENST00000488454 WNT11O96014 354 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 HLA-DQA2P01906 255 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 OR8G3PP0DMU2 310 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 PAX7P23759 505 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 EPHA2P29317 976 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 KIR2DL3P43628 341 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 CAPZA2P47755 286 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 ZNF133P52736 654 aaPredicted RBP9.03□□□□□ -0.96
SKA1-204ENST00000488454 SLC25A1P53007 311 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 GLO1Q04760 184 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 GABRA6Q16445 453 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 TIMM23BQ5SRD1 257 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 ZNF362Q5T0B9 420 aaPredicted RBP9.03□□□□□ -0.96
SKA1-204ENST00000488454 C1QTNF12Q5T7M4 302 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 TTC23Q5W5X9 447 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 C12orf73Q69YU5 71 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 ALKBH2Q6NS38 261 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 OR6V1Q8N148 313 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 SLC22A24Q8N4F4 322 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 DHRSXQ8N5I4 330 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 PROKR2Q8NFJ6 384 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 TRUB1Q8WWH5 349 aaKnown RBP9.03□□□□□ -0.96
SKA1-204ENST00000488454 CYGBQ8WWM9 190 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 BCL2L2Q92843 193 aaPredicted RBP9.03□□□□□ -0.96
SKA1-204ENST00000488454 NMD3Q96D46 503 aaKnown RBP9.03□□□□□ -0.96
SKA1-204ENST00000488454 HRASLS5Q96KN8 279 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 OR51V1Q9H2C8 321 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 RASSF4Q9H2L5 321 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 SIAEQ9HAT2 523 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 OBP2BQ9NPH6 170 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 TMEM38BQ9NVV0 291 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 FAM118AQ9NWS6 357 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 COA3Q9Y2R0 106 aaPredicted RBP9.03□□□□□ -0.96
SKA1-204ENST00000488454 GMPPBQ9Y5P6 360 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 PCNX1Q96RV3 2341 aa9.03□□□□□ -0.96
SKA1-204ENST00000488454 MYO18BQ8IUG5 2567 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 IGKV1D-43A0A0B4J1Z2 117 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 SH3D21A4FU49 640 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 FAM183AA6NL82 134 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 FAM171A2A8MVW0 826 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 SEC14L2O76054 403 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 CD79AP11912 226 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 B4GALT1P15291 398 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 CTLA4P16410 223 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 LAP3P28838 519 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 CDAP32320 146 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 GGT2P36268 569 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms