RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 HIST1H1CP16403 213 aaKnown RBP12.89□□□□□ -0.35
RER1-207ENST00000488353 TLX1P31314 330 aaPredicted RBP12.89□□□□□ -0.35
RER1-207ENST00000488353 CXADRP78310 365 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 SRSF3P84103 164 aaKnown RBP12.89□□□□□ -0.35
RER1-207ENST00000488353 GUCA2AQ02747 115 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 YOD1Q5VVQ6 348 aaPredicted RBP12.89□□□□□ -0.35
RER1-207ENST00000488353 NDUFAF7Q7L592 441 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 ZAR1Q86SH2 424 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 FRMD1Q8N878 549 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 TMEM52Q8NDY8 209 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 RNF141Q8WVD5 230 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 DVL3Q92997 716 aaPredicted RBP12.89□□□□□ -0.35
RER1-207ENST00000488353 BMFQ96LC9 184 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 PTCHD1Q96NR3 888 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 CDV3Q9UKY7 258 aaKnown RBP12.89□□□□□ -0.35
RER1-207ENST00000488353 DAPP1Q9UN19 280 aa12.89□□□□□ -0.35
RER1-207ENST00000488353 COLCA2A8K830 154 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 C1orf196B1AJZ1 125 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 CTAG2O75638 210 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 DBIP07108 87 aaKnown RBP12.88□□□□□ -0.35
RER1-207ENST00000488353 NID1P14543 1247 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 PTAFRP25105 342 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 NFYBP25208 207 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 CD34P28906 385 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 ACTR1BP42025 376 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 ACTBP60709 375 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 ACTR1AP61163 376 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 ACTG1P63261 375 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 PLA2G7Q13093 441 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 ATXN7L3Q14CW9 347 aaPredicted RBP12.88□□□□□ -0.35
RER1-207ENST00000488353 EIF2S3LQ2VIR3 472 aaKnown RBP12.88□□□□□ -0.35
RER1-207ENST00000488353 LIPNQ5VXI9 398 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 LRRTM1Q86UE6 522 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 ZSCAN1Q8NBB4 408 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 OR5T3Q8NGG3 340 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 ZNF350Q9GZX5 532 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 SEBOXQ9HB31 216 aaPredicted RBP12.88□□□□□ -0.35
RER1-207ENST00000488353 MMP26Q9NRE1 261 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 TMEM100Q9NV29 134 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 STEAP1Q9UHE8 339 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 TRAV18A0A075B6X5 111 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 MEIS3P1A6NDR6 274 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 SULT2B1O00204 365 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 GABRA3P34903 492 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 PLEKHN1Q494U1 663 aaPredicted RBP12.88□□□□□ -0.35
RER1-207ENST00000488353 PRRT3Q5FWE3 981 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 UNQ6126/PRO20091Q6UXV3 157 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 OR5AP2Q8NGF4 316 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 SCARF2Q96GP6 870 aaPredicted RBP12.88□□□□□ -0.35
RER1-207ENST00000488353 HSPA12BQ96MM6 686 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 OR2A5Q96R48 311 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 SERINC2Q96SA4 455 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 DHCR7Q9UBM7 475 aaKnown RBP12.88□□□□□ -0.35
RER1-207ENST00000488353 CHRNA9Q9UGM1 479 aa12.88□□□□□ -0.35
RER1-207ENST00000488353 FGF17O60258 216 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 HTR3BO95264 441 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 IGHV2-70P01814 119 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 TPT1P13693 172 aaKnown RBP12.87□□□□□ -0.35
RER1-207ENST00000488353 TAS2R19P59542 299 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 DHRS2Q13268 280 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 CORO6Q6QEF8 472 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 TMEM205Q6UW68 189 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 IL34Q6ZMJ4 242 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 ABHD13Q7L211 337 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 GABRG1Q8N1C3 465 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 OR4A4PQ8NGN8 299 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 OR5AK2Q8NH90 309 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 STOML3Q8TAV4 291 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 SEC22AQ96IW7 307 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 WSB2Q9NYS7 404 aaPredicted RBP12.87□□□□□ -0.35
RER1-207ENST00000488353 MYO15AQ9UKN7 3530 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 C19orf53Q9UNZ5 99 aaPredicted RBP12.87□□□□□ -0.35
RER1-207ENST00000488353 PLEKHA6Q9Y2H5 1048 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 NOP16Q9Y3C1 178 aaKnown RBP12.87□□□□□ -0.35
RER1-207ENST00000488353 HEBP2Q9Y5Z4 205 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 FANCMQ8IYD8 2048 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 TCRBV21S2A2A0A5A6 115 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 PSMD9O00233 223 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 MAS1P04201 325 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 CT62P0C5K7 136 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 PVRP15151 417 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 CBR1P16152 277 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 PAX6P26367 422 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 ABCD3P28288 659 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 RBM34P42696 430 aaKnown RBP12.87□□□□□ -0.35
RER1-207ENST00000488353 SOX2P48431 317 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 PRKXP51817 358 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 ATP1B3P54709 279 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 NFATC4Q14934 902 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 RNF212Q495C1 297 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 FHL5Q5TD97 284 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 NKAIN2Q5VXU1 208 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 NAA40Q86UY6 237 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 PARGQ86W56 976 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 NT5CQ8TCD5 201 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 PHOSPHO1Q8TCT1 267 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 MNTQ99583 582 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 EGLN1Q9GZT9 426 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 TMEM27Q9HBJ8 222 aa12.87□□□□□ -0.35
RER1-207ENST00000488353 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms