RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SLC16A7O60669 478 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 CTAG2O75638 210 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 RENP00797 406 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 CELA3BP08861 270 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 EPHA2P29317 976 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 SSTR2P30874 369 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 GRK5P34947 590 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 IDH3GP51553 393 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-210ENST00000488228 KRTAP10-9P60411 292 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 ELF3P78545 371 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-210ENST00000488228 MRPS34P82930 218 aaKnown RBP9.64□□□□□ -0.87
UBE4B-210ENST00000488228 NPRL3Q12980 569 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 CRMP1Q14194 572 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 GINS1Q14691 196 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 DAZAP2Q15038 168 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-210ENST00000488228 BEX5Q5H9J7 111 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 TMEM236Q5W0B7 351 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 ADAM5Q6NVV9 412 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 SLC27A4Q6P1M0 643 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-210ENST00000488228 MDP1Q86V88 176 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 LRRC18Q8N456 261 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 SLC22A24Q8N4F4 322 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 CBR4Q8N4T8 237 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 SLC37A3Q8NCC5 494 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 NPEPL1Q8NDH3 523 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 OR9Q1Q8NGQ5 310 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 FGFBP3Q8TAT2 258 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 C14orf79Q96F83 325 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 BOD1Q96IK1 185 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 USB1Q9BQ65 265 aaKnown RBP9.64□□□□□ -0.87
UBE4B-210ENST00000488228 CLEC4MQ9H2X3 399 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-210ENST00000488228 RIBC2Q9H4K1 309 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 EMC7Q9NPA0 242 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 BAIAP2Q9UQB8 552 aa9.64□□□□□ -0.87
UBE4B-210ENST00000488228 DSCAMO60469 2012 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 RTTNQ86VV8 2226 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 DPRXA6NFQ7 191 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 RIIAD1A6NNX1 92 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 FAM171A2A8MVW0 826 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 FARS2O95363 451 aaKnown RBP9.63□□□□□ -0.87
UBE4B-210ENST00000488228 WNT11O96014 354 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 PLAUP00749 431 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 ALPLP05186 524 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 SCG5P05408 212 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 GYPBP06028 91 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 OR8G3PP0DMU2 310 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 CD79AP11912 226 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 ANPEPP15144 967 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF3P17036 446 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 LAP3P28838 519 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 PYCR1P32322 319 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 GIPRP48546 466 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 CENPAP49450 140 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 CRISP1P54107 249 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 PIGFQ07326 219 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 DAG1Q14118 895 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 SGCAQ16586 387 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 MEP1BQ16820 701 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 ACSM5Q6NUN0 579 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 UGT2A3Q6UWM9 527 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 FOXL2NBQ6ZUU3 175 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 ZNF771Q7L3S4 317 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-210ENST00000488228 OR6V1Q8N148 313 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 KBTBD8Q8NFY9 601 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 FNDC8Q8TC99 324 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 NANOS1Q8WY41 292 aaKnown RBP9.63□□□□□ -0.87
UBE4B-210ENST00000488228 NRGNQ92686 78 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 SNX18Q96RF0 628 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 RBM4BQ9BQ04 359 aaKnown RBP9.63□□□□□ -0.87
UBE4B-210ENST00000488228 RBM4Q9BWF3 364 aaKnown RBP9.63□□□□□ -0.87
UBE4B-210ENST00000488228 OSBPL10Q9BXB5 764 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 HCAR1Q9BXC0 346 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 MED20Q9H944 212 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 SLC25A19Q9HC21 320 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 NGBQ9NPG2 151 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 OBP2BQ9NPH6 170 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 CMC2Q9NRP2 79 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 RASSF1Q9NS23 344 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 KLHL21Q9UJP4 597 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 COA3Q9Y2R0 106 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-210ENST00000488228 NAV2Q8IVL1 2488 aa9.63□□□□□ -0.87
UBE4B-210ENST00000488228 MAST4O15021 2626 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 IGHV1-18A0A0C4DH31 117 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 FAM221AA4D161 298 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 FAM183AA6NL82 134 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 CYSRT1A8MQ03 144 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 ABCD4O14678 606 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 SURF4O15260 269 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 AHCYL1O43865 530 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 KHDRBS3O75525 346 aaKnown RBP9.62□□□□□ -0.87
UBE4B-210ENST00000488228 UBL3O95164 117 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 MPZL1O95297 269 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 IFNGP01579 166 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 CECR9P0C854 216 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 GAAP10253 952 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 CLUP10909 449 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 MSR1P21757 451 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 CD40P25942 277 aa9.62□□□□□ -0.87
UBE4B-210ENST00000488228 PEX2P28328 305 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms