RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TTYH2Q9BSA4 534 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 TSSK1BQ9BXA7 367 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 DERL2Q9GZP9 239 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 COMMD4Q9H0A8 199 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 CIDEBQ9UHD4 219 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 MUTYHQ9UIF7 546 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 EXOSC1Q9Y3B2 195 aaKnown RBP3.27□□□□□ -1.89
PTCD3-216ENST00000487043 MAB21L2Q9Y586 359 aa3.27□□□□□ -1.89
PTCD3-216ENST00000487043 BPTFQ12830 3046 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 TRPM6Q9BX84 2022 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 IGHV1OR15-9A0A0B4J2B8 117 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 SLC5A10A0PJK1 596 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 MGAT4DA6NG13 374 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 OR2AG2A6NM03 316 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 SYCE1LA8MT33 242 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 A8MXK9 166 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 TMEM114B3SHH9 223 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 TCP11X1B4DZS4 312 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 PRAMEF26H0Y7S4 382 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 CDC7O00311 574 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 LIN7AO14910 233 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 RAD51BO15315 384 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 SLC31A1O15431 190 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 PI15O43692 258 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 NUDT21O43809 227 aaKnown RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ZG16O60844 167 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 EDF1O60869 148 aaKnown RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 SNNO75324 88 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 POP7O75817 140 aaKnown RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 SEMA4FO95754 770 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 IGHV4-34P06331 123 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 IGFBP1P08833 259 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 MPC1LP0DKB6 136 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 MYL2P10916 166 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 NEFHP12036 1026 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 CPN1P15169 458 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 XRCC1P18887 633 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 IMPDH1P20839 514 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 NT5EP21589 574 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 BGNP21810 368 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 HOXA6P31267 233 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 NUDT1P36639 197 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 PPT1P50897 306 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 CRIP2P52943 208 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ATP12AP54707 1039 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 DNAJB13P59910 316 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 HILS1P60008 231 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 PFN3P60673 137 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 PLOD1Q02809 727 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ZNF33BQ06732 778 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 SIGLEC14Q08ET2 396 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 LRRC74AQ0VAA2 488 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 BST1Q10588 318 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ASPHQ12797 758 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 IRF4Q15306 451 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ZMYND11Q15326 602 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 OR4D1Q15615 310 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 KRTAP27-1Q3LI81 207 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 BCL7AQ4VC05 210 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 CDKL4Q5MAI5 379 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ZYG11AQ6WRX3 759 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 SLC22A9Q8IVM8 553 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ZNF547Q8IVP9 402 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 C10orf107Q8IVU9 208 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 CPNE9Q8IYJ1 553 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 LRRC34Q8IZ02 419 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 CNIH3Q8TBE1 160 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 TRMT10AQ8TBZ6 339 aaKnown RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 LKAAEAR1Q8TD35 194 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 NAT14Q8WUY8 206 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ELMO1Q92556 727 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 KLK6Q92876 244 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 SLC45A3Q96JT2 553 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 CNDP1Q96KN2 507 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 BMFQ96LC9 184 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ZNF597Q96LX8 424 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 ATOH8Q96SQ7 321 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 CCDC28BQ9BUN5 200 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 GON7Q9BXV9 100 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 OCR1Q9BZK8 76 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 DRC3Q9H069 523 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 OR2AG1Q9H205 316 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 RDH14Q9HBH5 336 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 PTBP2Q9UKA9 531 aaKnown RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 TMCO1Q9UM00 188 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 EIF3LQ9Y262 564 aaKnown RBP3.26□□□□□ -1.89
PTCD3-216ENST00000487043 GSTK1Q9Y2Q3 226 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 UNC80Q8N2C7 3258 aa3.26□□□□□ -1.89
PTCD3-216ENST00000487043 DOCK9Q9BZ29 2069 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 PIKFYVEQ9Y2I7 2098 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 METTL21EPA6NDL7 271 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 TRABD2BA6NFA1 517 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 A8MT66 165 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 GFYI3L273 518 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 UBXN8O00124 270 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 SOCS3O14543 225 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 KMOO15229 486 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 GPRIN2O60269 458 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 SMIM24O75264 130 aa3.25□□□□□ -1.89
PTCD3-216ENST00000487043 PSIP1O75475 530 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms