RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 TBC1D28Q2M2D7 210 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 FAM205BPQ63HN1 556 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 IGFN1Q86VF2 1251 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 LRP11Q86VZ4 500 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 ZNF786Q8N393 782 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 NSMAFQ92636 917 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 NABP1Q96AH0 204 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 SYT3Q9BQG1 590 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 LRMDAQ9H2I8 198 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 CDH20Q9HBT6 801 aa15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 DCAF13Q9NV06 445 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 FAM32AQ9Y421 112 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-209ENST00000486100 JMJD1CQ15652 2540 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 A6NIZ1 184 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 M0R233 179 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 GMNNO75496 209 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 SNAP29O95721 258 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 GIFP27352 417 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 GZMKP49863 264 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 RAP1BP61224 184 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 RAP1AP62834 184 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 SGCAQ16586 387 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 IQCCQ4KMZ1 466 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 FAM27BQ5VT28 67 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 RGS7BPQ6MZT1 257 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 PAQR4Q8N4S7 273 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 FAM156AQ8NDB6 213 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 OR13C2Q8NGS9 318 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 ZNF519Q8TB69 540 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 SLC7A13Q8TCU3 470 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 UBASH3BQ8TF42 649 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 TSPAN32Q96QS1 320 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 BPESC1Q9GZL8 116 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 TPK1Q9H3S4 243 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 GORASP2Q9H8Y8 452 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 CCNB1IP1Q9NPC3 277 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 NDUFAF4Q9P032 175 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 DUSP13Q9UII6 198 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 FZR1Q9UM11 496 aa15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 SAMD4AQ9UPU9 718 aaKnown RBP15.82■□□□□ 0.12
PRPF40A-209ENST00000486100 IGHV4-61A0A0C4DH41 118 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 A0A1W2PRQ8 180 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 CDC42EP2O14613 210 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 H1F0P07305 194 aaKnown RBP15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 FAM157BP0CG42 384 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 RHCEP18577 417 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 APLNRP35414 380 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 GUCA1AP43080 201 aaPredicted RBP15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 RAD52P43351 418 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 ALDH3B1P43353 468 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 UCP2P55851 309 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 HSF2Q03933 536 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 DGCR6Q14129 220 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 ZBED5Q49AG3 693 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 PABPC1L2AQ5JQF8 200 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 PODNL1Q6PEZ8 512 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 RNF148Q8N7C7 305 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 CLDN22Q8N7P3 220 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 ARIH2OSQ8N7S6 290 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 CPEB3Q8NE35 698 aaKnown RBP15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 C7orf34Q96L11 122 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 TMEM160Q9NX00 188 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 MYEF2Q9P2K5 600 aaKnown RBP15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 TMEM5Q9Y2B1 443 aa15.81■□□□□ 0.12
PRPF40A-209ENST00000486100 CD14P08571 375 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 APEHP13798 732 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 ZNF23P17027 643 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 ZNF32P17041 273 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 APEX1P27695 318 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 RPL4P36578 427 aaKnown RBP15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 GPR4P46093 362 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 GYS2P54840 703 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 SELENOVP59797 346 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 ERVK-25P63136 954 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 GNGT1P63211 74 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 CHRFAM7AQ494W8 412 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 FOXL2NBQ6ZUU3 175 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 PIGWQ7Z7B1 504 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 C11orf40Q8WZ69 217 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 BCL2L14Q9BZR8 327 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 GRHPRQ9UBQ7 328 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 ARL2BPQ9Y2Y0 163 aa15.8■□□□□ 0.12
PRPF40A-209ENST00000486100 PTP4A3O75365 173 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 LCKP06239 509 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 CST2P09228 141 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 HSD17B1P14061 328 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 ZNF250P15622 560 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 ZNF26P17031 533 aaPredicted RBP15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 TCN1P20061 433 aaPredicted RBP15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 STOMP27105 288 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 PSG4Q00888 419 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 RIN1Q13671 783 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 MAD2L1BPQ15013 274 aaPredicted RBP15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 SYNPRQ8TBG9 265 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 POM121L2Q96KW2 1035 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 LRRC37BQ96QE4 947 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 TAGLN3Q9UI15 199 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 GPR160Q9UJ42 338 aa15.79■□□□□ 0.12
PRPF40A-209ENST00000486100 SONP18583 2426 aaKnown RBP15.78■□□□□ 0.12
PRPF40A-209ENST00000486100 IGLV3-9A0A075B6K5 115 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms