RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 SELENOVP59797 346 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 CCL8P80075 99 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 SGCAQ16586 387 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 NRN1LQ496H8 165 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 IGFN1Q86VF2 1251 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 MICU2Q8IYU8 434 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 POU5F2Q8N7G0 328 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 CLDN22Q8N7P3 220 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 PCYOX1LQ8NBM8 494 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 CPEB3Q8NE35 698 aaKnown RBP18.43■□□□□ 0.54
USP40-215ENST00000484528 OR1J2Q8NGS2 313 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 SNX33Q8WV41 574 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 RCN3Q96D15 328 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 NMD3Q96D46 503 aaKnown RBP18.43■□□□□ 0.54
USP40-215ENST00000484528 CCNB1IP1Q9NPC3 277 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 HINT3Q9NQE9 182 aaKnown RBP18.43■□□□□ 0.54
USP40-215ENST00000484528 ARMCX1Q9P291 453 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 CAPN7Q9Y6W3 813 aa18.43■□□□□ 0.54
USP40-215ENST00000484528 IGLV3-9A0A075B6K5 115 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 C17orf100A8MU93 164 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 CENPBD1B2RD01 187 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 B4DSR2 109 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 IGF2P01344 180 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 TSPAN19P0C672 248 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 ZNF250P15622 560 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 ZNF32P17041 273 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 ZNF133P52736 654 aaPredicted RBP18.42■□□□□ 0.54
USP40-215ENST00000484528 DVL1P1P54792 670 aaPredicted RBP18.42■□□□□ 0.54
USP40-215ENST00000484528 MRPS34P82930 218 aaKnown RBP18.42■□□□□ 0.54
USP40-215ENST00000484528 ALG10Q5BKT4 473 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 TMEM154Q6P9G4 183 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 GLCCI1Q86VQ1 547 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 OR1J1Q8NGS3 322 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 AKR7LQ8NHP1 331 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 ZNF519Q8TB69 540 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 LIPHQ8WWY8 451 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 C11orf40Q8WZ69 217 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 NABP1Q96AH0 204 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 PRRC1Q96M27 445 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 BCL2L14Q9BZR8 327 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 RACGAP1Q9H0H5 632 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 LRMDAQ9H2I8 198 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 KCNN2Q9H2S1 579 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 SIAEQ9HAT2 523 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 GID8Q9NWU2 228 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 RHCGQ9UBD6 479 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 A4GNTQ9UNA3 340 aa18.42■□□□□ 0.54
USP40-215ENST00000484528 NBEAL1Q6ZS30 2694 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 THRBP10828 461 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 RAD52P43351 418 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 ERVK-25P63136 954 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 ST3GAL3Q11203 375 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 SPATA46Q5T0L3 261 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 UGT2A3Q6UWM9 527 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 VTCN1Q7Z7D3 282 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 BPIFA2Q96DR5 249 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 TXNIPQ9H3M7 391 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 MRGBPQ9NV56 204 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 STX18Q9P2W9 335 aaKnown RBP18.41■□□□□ 0.54
USP40-215ENST00000484528 GPR160Q9UJ42 338 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 HIF3AQ9Y2N7 669 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 SNX13Q9Y5W8 968 aa18.41■□□□□ 0.54
USP40-215ENST00000484528 TRAV27A0A087WT01 109 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 ELOVL7A1L3X0 281 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 J3KTA2 159 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 MGRN1O60291 552 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 MAKP20794 623 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 STOMP27105 288 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 TMEM33P57088 247 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 AVPI1Q5T686 147 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 SLC25A47Q6Q0C1 308 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 NRMQ8IXM6 262 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 ZNF101Q8IZC7 436 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 ZNF416Q9BWM5 594 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 SMURF2Q9HAU4 748 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 CMTM6Q9NX76 183 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 SLCO1C1Q9NYB5 712 aa18.4■□□□□ 0.54
USP40-215ENST00000484528 NPIPB13A6NJU9 1138 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 NPIPB4C9JG80 1138 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 TPD52L2O43399 206 aaKnown RBP18.39■□□□□ 0.53
USP40-215ENST00000484528 TFP02787 698 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 GAAP10253 952 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 DRD4P21917 467 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 WNT5AP41221 380 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 CTXN1P60606 82 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 RPL27P61353 136 aaKnown RBP18.39■□□□□ 0.53
USP40-215ENST00000484528 SELENOWP63302 87 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 MRPS11P82912 194 aaKnown RBP18.39■□□□□ 0.53
USP40-215ENST00000484528 GUCY1A3Q02108 690 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 MVKQ03426 396 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 TSTQ16762 297 aaKnown RBP18.39■□□□□ 0.53
USP40-215ENST00000484528 LIPNQ5VXI9 398 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 OR51A7Q8NH64 312 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 TMEM186Q96B77 213 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 HIF1ANQ9NWT6 349 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 CACNG2Q9Y698 323 aa18.39■□□□□ 0.53
USP40-215ENST00000484528 ARHGAP32A7KAX9 2087 aa18.38■□□□□ 0.53
USP40-215ENST00000484528 LOC100509620A0A075B734 347 aa18.38■□□□□ 0.53
USP40-215ENST00000484528 C5orf49A4QMS7 147 aa18.38■□□□□ 0.53
USP40-215ENST00000484528 ZNF682O95780 498 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms