RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CD300LFQ8TDQ1 290 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 TAAR8Q969N4 342 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 SNX22Q96L94 193 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 ADAD1Q96M93 576 aaKnown RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 KLHL5Q96PQ7 755 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 TPSD1Q9BZJ3 242 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 TRIM36Q9NQ86 728 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 URGCP-MRPS24S4R325 110 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 V9GYS6 101 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 PLXNA3P51805 1871 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 MGAT4DA6NG13 374 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 YJEFN3A6XGL0 299 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 K7ERQ8 282 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 MASP2O00187 686 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 CYB5BO43169 146 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 RAMP1O60894 148 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 VAMP5O95183 116 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 BPNT1O95861 308 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 GCGP01275 180 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 CDK2P24941 298 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 DPP4P27487 766 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 TNFSF10P50591 281 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 ACTBP60709 375 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 PPP2CBP62714 309 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 ACTA2P62736 377 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 ACTG1P63261 375 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 ACTG2P63267 376 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 PPP2CAP67775 309 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 ACTC1P68032 377 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 ACTA1P68133 377 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 SLC10A7Q0GE19 358 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 MRPL49Q13405 166 aaKnown RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 GPNMBQ14956 572 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 CLEC12AQ5QGZ9 265 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 NUP54Q7Z3B4 507 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 BIVMQ86UB2 503 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 PIANPQ8IYJ0 282 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 TMEM99Q8N816 258 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 GPR32P1Q8NGA4 272 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 OR1J2Q8NGS2 313 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 OR13C2Q8NGS9 318 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 EDAQ92838 391 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 SLC41A3Q96GZ6 507 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 FAM124BQ9H5Z6 455 aaPredicted RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 MSL2Q9HCI7 577 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 PLA2G2EQ9NZK7 142 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 SCML2Q9UQR0 700 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 HEATR5AQ86XA9 2040 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 HELZP42694 1942 aaKnown RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 KIR2DL5BA0A0G2JN68 375 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 KIR2DL5BA0A0G2JPC4 375 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 SOCS6O14544 535 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 SCGNO76038 276 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 GALTP07902 379 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 CST2P09228 141 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 EPORP19235 508 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 HOXC8P31273 242 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 FAUP35544 74 aaKnown RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 CDC34P49427 236 aaPredicted RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 CLDN12P56749 244 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 TSTA3Q13630 321 aaPredicted RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 C1orf194Q5T5A4 169 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 ZNF705AQ6ZN79 300 aaPredicted RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 MRPL52Q86TS9 123 aaKnown RBP7.12□□□□□ -1.27
COL4A5-205ENST00000483338 KIR2DL5AQ8N109 375 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 OR5K2Q8NHB8 316 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 TMEM38AQ9H6F2 299 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 OR2S2Q9NQN1 319 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 KCNG2Q9UJ96 466 aa7.12□□□□□ -1.27
COL4A5-205ENST00000483338 KDELR3O43731 214 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 OR2J2O76002 312 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 ITGB2P05107 769 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 AKR1A1P14550 325 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 PNLIPP16233 465 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 HLA-GP17693 338 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 MAOAP21397 527 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 PRPH2P23942 346 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 FGF8P55075 233 aaPredicted RBP7.11□□□□□ -1.27
COL4A5-205ENST00000483338 PIN1Q13526 163 aaPredicted RBP7.11□□□□□ -1.27
COL4A5-205ENST00000483338 EIF5AL1Q6IS14 154 aaKnown RBP7.11□□□□□ -1.27
COL4A5-205ENST00000483338 MEX3BQ6ZN04 569 aaKnown RBP7.11□□□□□ -1.27
COL4A5-205ENST00000483338 DNM1P46Q6ZS02 220 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 ZBTB2Q8N680 514 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 OR4K5Q8NGD3 323 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 OR13D1Q8NGV5 346 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 CSGALNACT1Q8TDX6 532 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 GFI1Q99684 422 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 GPR87Q9BY21 358 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 ULBP1Q9BZM6 244 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 GSKIPQ9P0R6 139 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 CENPFP49454 3210 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 LOC105371242A0A075B767 164 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 GXYLT2A0PJZ3 443 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 CASTOR2A6NHX0 329 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 CCDC85CA6NKD9 419 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 GEMIN2O14893 280 aaKnown RBP7.11□□□□□ -1.27
COL4A5-205ENST00000483338 GMFGO60234 142 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 SNAI1O95863 264 aaPredicted RBP7.11□□□□□ -1.27
COL4A5-205ENST00000483338 TK1P04183 234 aa7.11□□□□□ -1.27
COL4A5-205ENST00000483338 CD34P28906 385 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms