RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PTDSS1P48651 473 aaKnown RBP18.19■□□□□ 0.5
SEC13-217ENST00000482647 SGCAQ16586 387 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 CLEC12AQ5QGZ9 265 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 CD300LDQ6UXZ3 194 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 TMEM179BQ7Z7N9 219 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 JAZF1Q86VZ6 243 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 CCL19Q99731 98 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 SEC61A2Q9H9S3 476 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 VSX1Q9NZR4 365 aaPredicted RBP18.19■□□□□ 0.5
SEC13-217ENST00000482647 ITGB1BP2Q9UKP3 347 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 MOKQ9UQ07 419 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 ATP23Q9Y6H3 246 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 CADP27708 2225 aa18.19■□□□□ 0.5
SEC13-217ENST00000482647 CELA3BP08861 270 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 PATE4P0C8F1 98 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 CDKN2AP42771 156 aaKnown RBP18.18■□□□□ 0.5
SEC13-217ENST00000482647 NAAAQ02083 359 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 TMEM53Q6P2H8 277 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 LRRC18Q8N456 261 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 SMAP2Q8WU79 429 aaPredicted RBP18.18■□□□□ 0.5
SEC13-217ENST00000482647 HTRA1Q92743 480 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 NRBF2Q96F24 287 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 NIPSNAP1Q9BPW8 284 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 SYT4Q9H2B2 425 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 RNF121Q9H920 327 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 ZNF556Q9HAH1 456 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 NTN4Q9HB63 628 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 NOX3Q9HBY0 568 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 FAIMQ9NVQ4 179 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 OTOGQ6ZRI0 2925 aa18.18■□□□□ 0.5
SEC13-217ENST00000482647 A0A1W2PPL8 197 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 ATP6V1G2-DDX39BF2Z307 99 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 SLC16A7O60669 478 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 KHDRBS3O75525 346 aaKnown RBP18.17■□□□□ 0.5
SEC13-217ENST00000482647 RENP00797 406 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 FCGR1AP12314 374 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 HIST1H1CP16403 213 aaKnown RBP18.17■□□□□ 0.5
SEC13-217ENST00000482647 FASP25445 335 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 ATP6AP1Q15904 470 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 FAM27BQ5VT28 67 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 SHQ1Q6PI26 577 aaKnown RBP18.17■□□□□ 0.5
SEC13-217ENST00000482647 FOXL2NBQ6ZUU3 175 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 PTCHD4Q6ZW05 846 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 FGFBP3Q8TAT2 258 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 NABP1Q96AH0 204 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 SNX18Q96RF0 628 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 DHRS9Q9BPW9 319 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 TSSK6Q9BXA6 273 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 RERGLQ9H628 205 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 TBC1D23Q9NUY8 699 aa18.17■□□□□ 0.5
SEC13-217ENST00000482647 BEX4Q9NWD9 120 aaPredicted RBP18.17■□□□□ 0.5
SEC13-217ENST00000482647 AKAP9Q99996 3911 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 E7EQL1 145 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 BHLHE40O14503 412 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 ANXA8P13928 327 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 CTLA4P16410 223 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 ZNF14P17017 642 aaPredicted RBP18.16■□□□□ 0.5
SEC13-217ENST00000482647 ACTR3P61158 418 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 ETFDHQ16134 617 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 DEFB113Q30KQ7 82 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 LEG1Q6P5S2 330 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 YTHDF3Q7Z739 585 aaKnown RBP18.16■□□□□ 0.5
SEC13-217ENST00000482647 OR4F15Q8NGB8 312 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 OR4K13Q8NH42 304 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 ZNF75AQ96N20 296 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 RAB3IPQ96QF0 476 aaPredicted RBP18.16■□□□□ 0.5
SEC13-217ENST00000482647 NMNAT3Q96T66 252 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 BDH2Q9BUT1 245 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 PLA2G12AQ9BZM1 189 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 NUAK2Q9H093 628 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 CCNB1IP1Q9NPC3 277 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 BAIAP2Q9UQB8 552 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 LAMP3Q9UQV4 416 aa18.16■□□□□ 0.5
SEC13-217ENST00000482647 TMCC2O75069 709 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 SOX14O95416 240 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 SERPINA5P05154 406 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 IGFBP1P08833 259 aaPredicted RBP18.15■□□□□ 0.5
SEC13-217ENST00000482647 CST2P09228 141 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 MSR1P21757 451 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 PRKACGP22612 351 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 LAP3P28838 519 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 CRABP1P29762 137 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 FABP6P51161 128 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 PLP2Q04941 152 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 RAB39AQ14964 217 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 SLC35F1Q5T1Q4 408 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 ZNF544Q6NX49 715 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 DNM1P34Q6PK57 102 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 MYPOPQ86VE0 399 aaPredicted RBP18.15■□□□□ 0.5
SEC13-217ENST00000482647 GLB1L2Q8IW92 636 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 C10orf67Q8IYJ2 551 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 HS3ST5Q8IZT8 346 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 LNX2Q8N448 690 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 ATG16L2Q8NAA4 619 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 OR2T33Q8NG76 320 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 OR52E2Q8NGJ4 325 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 OR8D4Q8NGM9 314 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 TMEM171Q8WVE6 324 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 MS4A3Q96HJ5 214 aa18.15■□□□□ 0.5
SEC13-217ENST00000482647 FOXC2Q99958 501 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms