RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 OR6C68A6NDL8 312 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 CENPBD1B2RD01 187 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 ENTPD6O75354 484 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 GYPBP06028 91 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 CLUP10909 449 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 CCKARP32238 428 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 NUDT6P53370 316 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 EFNB1P98172 346 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 CDK5R2Q13319 367 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 SMN1Q16637 294 aaKnown RBP17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 HIST3H3Q16695 136 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 ZNF786Q8N393 782 aa17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 KLF2Q9Y5W3 355 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC12-220ENST00000482645 IGKV1D-43A0A0B4J1Z2 117 aa17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 NR2C1P13056 603 aa17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 PSMB1P20618 241 aaKnown RBP17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 ARF1P84077 181 aaKnown RBP17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 TGFBR3Q03167 851 aa17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 KLHL12Q53G59 568 aa17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 THEM4Q5T1C6 240 aa17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 ALKBH2Q6NS38 261 aa17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 S100PBPQ96BU1 408 aa17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 ZNF582Q96NG8 517 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 ACTR6Q9GZN1 396 aa17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 ICE1Q9Y2F5 2266 aa17.5■□□□□ 0.39
TRAPPC12-220ENST00000482645 A0A096LPE4 126 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 A0A1W2PPZ6 126 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 RPL36A-HNRNPH2H7BZ11 118 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 DHHO43323 396 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 RPS7P62081 194 aaKnown RBP17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 MEDAGQ5VYS4 303 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 NXNL2Q5VZ03 156 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 LAIR2Q6ISS4 152 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 HTRA1Q92743 480 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 FOXN4Q96NZ1 517 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 TSSK2Q96PF2 358 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 HDHD5Q9BXW7 423 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 OR51V1Q9H2C8 321 aa17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 VSX1Q9NZR4 365 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC12-220ENST00000482645 ZNF99A8MXY4 864 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 SLC16A7O60669 478 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 B4GALT1P15291 398 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 SPI1P17947 270 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 ZNF84P51523 738 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 CDH11P55287 796 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 TEKQ02763 1124 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 ETFDHQ16134 617 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 OCLNQ16625 522 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 HIKESHIQ53FT3 197 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 AADACL4Q5VUY2 407 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 GID4Q8IVV7 300 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 PROKR2Q8NFJ6 384 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 BPIFB6Q8NFQ5 453 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 STEAP2Q8NFT2 490 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 OR51L1Q8NGJ5 315 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 LINC01560Q8TB33 94 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 FNDC8Q8TC99 324 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 ZC3HAV1LQ96H79 300 aaKnown RBP17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 Q96MT0 163 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 SNX18Q96RF0 628 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 DDOQ99489 341 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 FOXB1Q99853 325 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 NUAK2Q9H093 628 aa17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 SRA1Q9HD15 236 aaKnown RBP17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 H2AFY2Q9P0M6 372 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC12-220ENST00000482645 A0A1W2PPL8 197 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 A0A1W2PR80 420 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 SLC1A7O00341 560 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 FAM20BO75063 409 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 CTLA4P16410 223 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 HOXC12P31275 282 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 CDAP32320 146 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 PYCR1P32322 319 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 CENPAP49450 140 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 SLC25A1P53007 311 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 SH3BGRP55822 239 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 SORDQ00796 357 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 APOFQ13790 326 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 C6orf141Q5SZD1 244 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 UGT2A3Q6UWM9 527 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 ZNF813Q6ZN06 617 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 OR1K1Q8NGR3 316 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 PTP4A1Q93096 173 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 NMD3Q96D46 503 aaKnown RBP17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 MED18Q9BUE0 208 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 NMNAT2Q9BZQ4 307 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 SEC61A2Q9H9S3 476 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 AMBNQ9NP70 447 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 USP9YO00507 2555 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 TUBAL3A6NHL2 446 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 FAM171A2A8MVW0 826 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 DCTN6O00399 190 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 PRODHO43272 600 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 AHCYL1O43865 530 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 XPNPEP2O43895 674 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 SLC2A5P22732 501 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 CAPZA2P47755 286 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 GABRA6Q16445 453 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 SLC25A30Q5SVS4 291 aa17.47■□□□□ 0.39
TRAPPC12-220ENST00000482645 OR7E24Q6IFN5 339 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms