RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 MAL2Q969L2 176 aa11.24□□□□□ -0.61
NDC1-202ENST00000480952 UPRTQ96BW1 309 aa11.24□□□□□ -0.61
NDC1-202ENST00000480952 SLC25A44Q96H78 314 aaPredicted RBP11.24□□□□□ -0.61
NDC1-202ENST00000480952 OR2J1Q9GZK6 312 aa11.24□□□□□ -0.61
NDC1-202ENST00000480952 KCNN2Q9H2S1 579 aa11.24□□□□□ -0.61
NDC1-202ENST00000480952 MSL2Q9HCI7 577 aa11.24□□□□□ -0.61
NDC1-202ENST00000480952 AIG1Q9NVV5 245 aa11.24□□□□□ -0.61
NDC1-202ENST00000480952 TRIM33Q9UPN9 1127 aa11.24□□□□□ -0.61
NDC1-202ENST00000480952 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.24□□□□□ -0.61
NDC1-202ENST00000480952 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 C5orf49A4QMS7 147 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 SLC22A31A6NKX4 558 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 RNF13O43567 381 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 MT-ATP6P00846 226 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 SERPINE1P05121 402 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 IL6P05231 212 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 CD55P08174 381 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 NUDT7P0C024 238 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 ZCCHC18P0CG32 403 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 RBMXP38159 391 aaKnown RBP11.23□□□□□ -0.61
NDC1-202ENST00000480952 ZNF84P51523 738 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 KRTAP10-3P60369 221 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 RELBQ01201 579 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 MELKQ14680 651 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 HLXQ14774 488 aaPredicted RBP11.23□□□□□ -0.61
NDC1-202ENST00000480952 PDCD1Q15116 288 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 ZMYND11Q15326 602 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 OR1Q1Q15612 314 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 NRN1LQ496H8 165 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 PABPC1L2AQ5JQF8 200 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 FAM205BPQ63HN1 556 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 OGFOD2Q6N063 350 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 ZNF101Q8IZC7 436 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 FAM110DQ8TAY7 271 aaPredicted RBP11.23□□□□□ -0.61
NDC1-202ENST00000480952 PKNOX2Q96KN3 472 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 ARHGDIGQ99819 225 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 MARCH7Q9H992 704 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 CCNB1IP1Q9NPC3 277 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 CGGBP1Q9UFW8 167 aaPredicted RBP11.23□□□□□ -0.61
NDC1-202ENST00000480952 KLHL21Q9UJP4 597 aa11.23□□□□□ -0.61
NDC1-202ENST00000480952 KMT2CQ8NEZ4 4911 aaKnown RBP11.22□□□□□ -0.61
NDC1-202ENST00000480952 A0A0B4J2E0 115 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 A0A1B0GX12 115 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 F5H0A9 414 aaPredicted RBP11.22□□□□□ -0.61
NDC1-202ENST00000480952 MMP7P09237 267 aaPredicted RBP11.22□□□□□ -0.61
NDC1-202ENST00000480952 PGA4P0DJD7 388 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 PGA3P0DJD8 388 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 ETS2P15036 469 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 TNFRSF1AP19438 455 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 TNFSF4P23510 183 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 WNT5AP41221 380 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 GDI2P50395 445 aaKnown RBP11.22□□□□□ -0.61
NDC1-202ENST00000480952 CLRN1P58418 232 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 GTDC1Q4AE62 458 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 BRD3OSQ6XYD6 125 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 C1orf174Q8IYL3 243 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 ZNF283Q8N7M2 679 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 ABHD4Q8TB40 342 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 MCHR2Q969V1 340 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 VPS33AQ96AX1 596 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 THOC1Q96FV9 657 aaKnown RBP11.22□□□□□ -0.61
NDC1-202ENST00000480952 SAMD8Q96LT4 415 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 TMEM43Q9BTV4 400 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 SSBP3Q9BWW4 388 aaPredicted RBP11.22□□□□□ -0.61
NDC1-202ENST00000480952 RSPO3Q9BXY4 272 aaPredicted RBP11.22□□□□□ -0.61
NDC1-202ENST00000480952 CHIAQ9BZP6 476 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 C20orf27Q9GZN8 174 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 PRDM13Q9H4Q3 707 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 RMND5AQ9H871 391 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 MEAF6Q9HAF1 191 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 A4GALTQ9NPC4 353 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 NOX4Q9NPH5 578 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 LRCH1Q9Y2L9 728 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 RNF114Q9Y508 228 aa11.22□□□□□ -0.61
NDC1-202ENST00000480952 TIMM8AO60220 97 aaPredicted RBP11.21□□□□□ -0.61
NDC1-202ENST00000480952 MGRN1O60291 552 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 TPST1O60507 370 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 ERLIN1O75477 346 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 SLC22A3O75751 556 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 TSPAN15O95858 294 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 IGHG1P01857 330 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 WNT2P09544 360 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 MDH2P40926 338 aaKnown RBP11.21□□□□□ -0.61
NDC1-202ENST00000480952 ETV4P43268 484 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 SLC1A6P48664 564 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 CDH12P55289 794 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 RGS8P57771 180 aaPredicted RBP11.21□□□□□ -0.61
NDC1-202ENST00000480952 PPP1CBP62140 327 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 RGNQ15493 299 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 MTX3Q5HYI7 312 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 C6orf10Q5SRN2 563 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 DHRS4L2Q6PKH6 230 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 Q6YL49 198 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 COMTD1Q86VU5 262 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 KIRREL3Q8IZU9 778 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 MUC20Q8N307 709 aaPredicted RBP11.21□□□□□ -0.61
NDC1-202ENST00000480952 POU5F2Q8N7G0 328 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 RAB40AQ8WXH6 277 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 ITCHQ96J02 903 aa11.21□□□□□ -0.61
NDC1-202ENST00000480952 POM121L2Q96KW2 1035 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms