RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 CENPBD1B2RD01 187 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 PIP5K1CO60331 668 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 VENTXO95231 258 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 ZNF32P17041 273 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 ZNF133P52736 654 aaPredicted RBP16.06■□□□□ 0.16
ABCF3-214ENST00000480562 FMODQ06828 376 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 TSTQ16762 297 aaKnown RBP16.06■□□□□ 0.16
ABCF3-214ENST00000480562 PCGF3Q3KNV8 242 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 C10orf128Q5T292 105 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 METTL21CQ5VZV1 264 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 FAHD2BQ6P2I3 314 aaPredicted RBP16.06■□□□□ 0.16
ABCF3-214ENST00000480562 HDDC2Q7Z4H3 204 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 OR1J1Q8NGS3 322 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 NMD3Q96D46 503 aaKnown RBP16.06■□□□□ 0.16
ABCF3-214ENST00000480562 FAHD2AQ96GK7 314 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 SH3GL1Q99961 368 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 SIKE1Q9BRV8 207 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 TMEM120AQ9BXJ8 343 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 SIAEQ9HAT2 523 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 CCNB1IP1Q9NPC3 277 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 CACNG2Q9Y698 323 aa16.06■□□□□ 0.16
ABCF3-214ENST00000480562 TPD52L2O43399 206 aaKnown RBP16.05■□□□□ 0.16
ABCF3-214ENST00000480562 RGS9O75916 674 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-214ENST00000480562 DRD4P21917 467 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 STOMP27105 288 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 MRPS34P82930 218 aaKnown RBP16.05■□□□□ 0.16
ABCF3-214ENST00000480562 CD47Q08722 323 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 SF3A3Q12874 501 aaKnown RBP eCLIP16.05■□□□□ 0.165e-6■■■■□ 19.6
ABCF3-214ENST00000480562 TOP3AQ13472 1001 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-214ENST00000480562 SGCAQ16586 387 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 SPATA46Q5T0L3 261 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 SHQ1Q6PI26 577 aaKnown RBP16.05■□□□□ 0.16
ABCF3-214ENST00000480562 USP51Q70EK9 711 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 MEX3DQ86XN8 651 aaKnown RBP16.05■□□□□ 0.16
ABCF3-214ENST00000480562 OR8J3Q8NGG0 315 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 AKR7LQ8NHP1 331 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 NABP1Q96AH0 204 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 KCNN2Q9H2S1 579 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 NKIRAS2Q9NYR9 191 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 MED31Q9Y3C7 131 aa16.05■□□□□ 0.16
ABCF3-214ENST00000480562 TRAV20A0A0B4J274 112 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 IGHV1-69-2A0A0G2JMI3 117 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 MRASO14807 208 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 IGHV3-13P01766 116 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 TSPAN19P0C672 248 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 WNT5AP41221 380 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 CRYBB2P43320 205 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 MMEL1Q495T6 779 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 CYBRD1Q53TN4 286 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 TMEM255AQ5JRV8 349 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 HDXQ7Z353 690 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 ZNF101Q8IZC7 436 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 CLDN22Q8N7P3 220 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 C10orf82Q8WW14 230 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 LIPHQ8WWY8 451 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 ZNF583Q96ND8 569 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 POLR2J2Q9GZM3 115 aaKnown RBP16.04■□□□□ 0.16
ABCF3-214ENST00000480562 POLR2J3Q9H1A7 115 aaKnown RBP16.04■□□□□ 0.16
ABCF3-214ENST00000480562 ZNF665Q9H7R5 613 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 DECR2Q9NUI1 292 aa16.04■□□□□ 0.16
ABCF3-214ENST00000480562 STX18Q9P2W9 335 aaKnown RBP16.04■□□□□ 0.16
ABCF3-214ENST00000480562 LOC100509620A0A075B734 347 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 MGRN1O60291 552 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 IGF2P01344 180 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 IFNA14P01570 189 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 FUT4P22083 530 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 MPV17P39210 176 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 ERVK-25P63136 954 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 TEKQ02763 1124 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 KLF10Q13118 480 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 LRRC23Q53EV4 343 aaPredicted RBP16.03■□□□□ 0.16
ABCF3-214ENST00000480562 ALG10Q5BKT4 473 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 THEM4Q5T1C6 240 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 ERICH5Q6P6B1 374 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 SLC25A47Q6Q0C1 308 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 C1orf229Q6ZS94 237 aaPredicted RBP16.03■□□□□ 0.16
ABCF3-214ENST00000480562 TPD52L3Q96J77 140 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 POM121L2Q96KW2 1035 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 TXNIPQ9H3M7 391 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 SMURF2Q9HAU4 748 aa16.03■□□□□ 0.16
ABCF3-214ENST00000480562 C5orf49A4QMS7 147 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 SPRY3O43610 288 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 PLPP2O43688 288 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 MPZL1O95297 269 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 PNPP00491 289 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 AVPP01185 164 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 MT-ND5P03915 603 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 THRBP10828 461 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 MAKP20794 623 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 GCH1P30793 250 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 GDI2P50395 445 aaKnown RBP16.02■□□□□ 0.16
ABCF3-214ENST00000480562 ZNF81P51508 661 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 PSG4Q00888 419 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 MOGQ16653 247 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 COQ5Q5HYK3 327 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 ACSM5Q6NUN0 579 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 ZNF771Q7L3S4 317 aaPredicted RBP16.02■□□□□ 0.16
ABCF3-214ENST00000480562 IGFN1Q86VF2 1251 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 SEMA6DQ8NFY4 1073 aa16.02■□□□□ 0.16
ABCF3-214ENST00000480562 SLC25A40Q8TBP6 338 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms