RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 MEP1BQ16820 701 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 RNLSQ5VYX0 342 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 FAM214BQ7L5A3 538 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 LINGO2Q7L985 606 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 LHFPL3Q86UP9 236 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 RPRMLQ8N4K4 120 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 ACBD7Q8N6N7 88 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 SLC26A10Q8NG04 563 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 ZNF837Q96EG3 531 aaPredicted RBP15.52■□□□□ 0.08
UPF3A-206ENST00000480362 CRLF2Q9HC73 371 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 GPR35Q9HC97 309 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 CHCHD3Q9NX63 227 aaKnown RBP15.52■□□□□ 0.08
UPF3A-206ENST00000480362 CLEC2DQ9UHP7 191 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 EXOSC1Q9Y3B2 195 aaKnown RBP15.52■□□□□ 0.08
UPF3A-206ENST00000480362 EMC9Q9Y3B6 208 aa15.52■□□□□ 0.08
UPF3A-206ENST00000480362 DAPL1A0PJW8 107 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ZNF593O00488 134 aaPredicted RBP15.51■□□□□ 0.07
UPF3A-206ENST00000480362 TOXO94900 526 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 SCG5P05408 212 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 OR2T7P0C7T2 308 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 LIMS3P0CW19 117 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 LIMS4P0CW20 117 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ZNF823P16415 610 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 PCMT1P22061 227 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 TIMP3P35625 211 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 KIR2DL2P43627 348 aaPredicted RBP15.51■□□□□ 0.07
UPF3A-206ENST00000480362 OR3A2P47893 321 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ZNF84P51523 738 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 PER3P56645 1201 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ADAM8P78325 824 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ROR2Q01974 943 aaKnown RBP15.51■□□□□ 0.07
UPF3A-206ENST00000480362 FOXF2Q12947 444 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 NEDD8Q15843 81 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 RIPPLY2Q5TAB7 128 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 CNEP1R1Q8N9A8 125 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ST6GALNAC3Q8NDV1 305 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 OR6N2Q8NGY6 317 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 OR2T27Q8NH04 317 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 C11orf40Q8WZ69 217 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ALKBH3Q96Q83 286 aaPredicted RBP15.51■□□□□ 0.07
UPF3A-206ENST00000480362 JAM3Q9BX67 310 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 YIPF3Q9GZM5 350 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ACOT13Q9NPJ3 140 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ERVK13-1Q9NX77 482 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 UPB1Q9UBR1 384 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 PRSS50Q9UI38 385 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 ERGIC3Q9Y282 383 aa15.51■□□□□ 0.07
UPF3A-206ENST00000480362 IL2RAP01589 272 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 HRGP04196 525 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 TFAP2AP05549 437 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 RPS27P42677 84 aaKnown RBP15.5■□□□□ 0.07
UPF3A-206ENST00000480362 GUCA1AP43080 201 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-206ENST00000480362 ENTPD1P49961 510 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 ACTC1P68032 377 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 ACTA1P68133 377 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 BLMHQ13867 455 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 SGCAQ16586 387 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 CEACAM16Q2WEN9 425 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 XAF1Q6GPH4 301 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 DPY19L4Q7Z388 723 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 CDC20BQ86Y33 519 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 UBE2J2Q8N2K1 259 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 NANOGP1Q8N7R0 232 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 OR10H5Q8NGA6 315 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 HTRA1Q92743 480 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 ZNF649Q9BS31 505 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 TTYH2Q9BSA4 534 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 VCX3AQ9NNX9 186 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 EMC7Q9NPA0 242 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 INPP5EQ9NRR6 644 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 TINAGQ9UJW2 476 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 COPS3Q9UNS2 423 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 MED12LQ86YW9 2145 aa15.5■□□□□ 0.07
UPF3A-206ENST00000480362 A0A1W2PQL4 384 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-206ENST00000480362 ZNF670-ZNF695F2Z2N8 137 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 RPL36A-HNRNPH2H7BZ11 118 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 ATXN7O15265 892 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-206ENST00000480362 PTHP01270 115 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 CRHP06850 196 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 SPARCP09486 303 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 TMIGD3P0DMS9 266 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-206ENST00000480362 GLI4P10075 376 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 PSKH1P11801 424 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 JUNBP17275 347 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-206ENST00000480362 NR1H2P55055 460 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 ZNF85Q03923 595 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 TBCEQ15813 527 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-206ENST00000480362 KCNMB1Q16558 191 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 FOXL2NBQ6ZUU3 175 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 OR6K3Q8NGY3 331 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 CDADC1Q9BWV3 514 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 POLE4Q9NR33 117 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 SH3BGRL2Q9UJC5 107 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 SVILO95425 2214 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 PIEZO2Q9H5I5 2752 aa15.49■□□□□ 0.07
UPF3A-206ENST00000480362 ARHGAP21Q5T5U3 1957 aa15.48■□□□□ 0.07
UPF3A-206ENST00000480362 ZNF587BE7ETH6 402 aa15.48■□□□□ 0.07
UPF3A-206ENST00000480362 MYL12BO14950 172 aa15.48■□□□□ 0.07
UPF3A-206ENST00000480362 LCKP06239 509 aa15.48■□□□□ 0.07
UPF3A-206ENST00000480362 CEACAM8P31997 349 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms