RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 PGPEP1LA6NFU8 196 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 CPSF4LA6NMK7 179 aaKnown RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 VWC2LB2RUY7 222 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 M0QX08 132 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 FXYD1O00168 92 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 PLPP3O14495 311 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 TLX2O43763 284 aaPredicted RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 SERPINB7O75635 380 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 HLA-HP01893 362 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 TK1P04183 234 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 IGFBP1P08833 259 aaPredicted RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 NQO1P15559 274 aaKnown RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 CBR1P16152 277 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 IDH3GP51553 393 aaPredicted RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 SH3BGRP55822 239 aaPredicted RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 UCP3P55916 312 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 DSCR9P59020 149 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 UBE2NP61088 152 aaKnown RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 IL1RL1Q01638 556 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 CHRNB3Q05901 458 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 LOXL1Q08397 574 aaPredicted RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 RBBP4Q09028 425 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 NFYCQ13952 458 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 CYP51A1Q16850 503 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 TMEM249Q2WGJ8 235 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 ENTPD8Q5MY95 495 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 C6orf52Q5T4I8 152 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 FAM205BPQ63HN1 556 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 CGB2Q6NT52 195 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 C5orf46Q6UWT4 87 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 MDP1Q86V88 176 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 UEVLDQ8IX04 471 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 GPR137CQ8N3F9 429 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 SCAIQ8N9R8 606 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 C11orf65Q8NCR3 313 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 OR10A6Q8NH74 314 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 VANGL1Q8TAA9 524 aaPredicted RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 SPSB4Q96A44 273 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 COG8Q96MW5 612 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 ZNF75AQ96N20 296 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 TNFRSF13CQ96RJ3 184 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 MCHR1Q99705 422 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 TMEM43Q9BTV4 400 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 PCDHAC1Q9H158 963 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 PLK3Q9H4B4 646 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 RABEP2Q9H5N1 569 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 VIPAS39Q9H9C1 493 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 B3GNT2Q9NY97 397 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 MRPL39Q9NYK5 338 aaKnown RBP6.28□□□□□ -1.4
SSR1-206ENST00000479365 NKIRAS2Q9NYR9 191 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 ZNF224Q9NZL3 707 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 USP22Q9UPT9 525 aa6.28□□□□□ -1.4
SSR1-206ENST00000479365 ALPK2Q86TB3 2170 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 CUBNO60494 3623 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 IGHV2OR16-5A0A0B4J2B6 119 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 A0A0G2JND7 137 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 TMEM129A0AVI4 362 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 A8MV72 311 aaPredicted RBP6.27□□□□□ -1.41
SSR1-206ENST00000479365 ZNF99A8MXY4 864 aaPredicted RBP6.27□□□□□ -1.41
SSR1-206ENST00000479365 ANGPT2O15123 496 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 CHP2O43745 196 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 FMO6PO60774 539 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 SERPINI2O75830 405 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 CRYAAP02489 173 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 GRPP07492 148 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 OR4A8P0C604 315 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 IGHV4-31P0DP07 118 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 SLC25A16P16260 332 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 TNFRSF1BP20333 461 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 PCGF2P35227 344 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 THBS4P35443 961 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 NCALDP61601 193 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 VLDLRP98155 873 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 PUDPQ08623 228 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 SF3A3Q12874 501 aaKnown RBP eCLIP6.27□□□□□ -1.41
SSR1-206ENST00000479365 NPRL3Q12980 569 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 PMS2P3Q13401 168 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 EFNB3Q15768 340 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 ZNF74Q16587 644 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 RABL3Q5HYI8 236 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 NANOGP8Q6NSW7 305 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 ZNF613Q6PF04 617 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 ZNF627Q7L945 461 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 RANBP3LQ86VV4 465 aaPredicted RBP6.27□□□□□ -1.41
SSR1-206ENST00000479365 HIPK1Q86Z02 1210 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 ZCCHC24Q8N2G6 241 aaKnown RBP6.27□□□□□ -1.41
SSR1-206ENST00000479365 SVOPLQ8N434 492 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 C10orf53Q8N6V4 93 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 LRRC17Q8N6Y2 441 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 NUP37Q8NFH4 326 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 BHLHE22Q8NFJ8 381 aaPredicted RBP6.27□□□□□ -1.41
SSR1-206ENST00000479365 FGFBP3Q8TAT2 258 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 ADAMTS16Q8TE57 1224 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 ST8SIA4Q92187 359 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 ZNF317Q96PQ6 595 aaPredicted RBP6.27□□□□□ -1.41
SSR1-206ENST00000479365 EPYCQ99645 322 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 DOK1Q99704 481 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 PRSS27Q9BQR3 290 aa6.27□□□□□ -1.41
SSR1-206ENST00000479365 ZNF426Q9BUY5 554 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms