RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 NOX3Q9HBY0 568 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 ARMC1Q9NVT9 282 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 ST6GALNAC2Q9UJ37 374 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 ITGB1BP2Q9UKP3 347 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 MGAT4BQ9UQ53 548 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 AP4S1Q9Y587 144 aa6.01□□□□□ -1.45
BRCA1-215ENST00000478531 SLC22A23A1A5C7 686 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 SHISA9B4DS77 424 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 H3BN98 237 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 HS3ST1O14792 307 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 SLC16A7O60669 478 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 RAF1P04049 648 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 OR8G3PP0DMU2 310 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 HIST1H1CP16403 213 aaKnown RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 CTLA4P16410 223 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 GSTM3P21266 225 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 PRKACGP22612 351 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 DNASE1P24855 282 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 POU1F1P28069 291 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 GUCA1AP43080 201 aaPredicted RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 CENPAP49450 140 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ARHGDIAP52565 204 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ETFDHQ16134 617 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 SLC36A3Q495N2 470 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF672Q499Z4 452 aaPredicted RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 RPL13AP3Q6NVV1 102 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF627Q7L945 461 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ZSCAN2Q7Z7L9 614 aaPredicted RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 ADCK1Q86TW2 530 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 DEPDC4Q8N2C3 294 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ATG16L2Q8NAA4 619 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 OR4K13Q8NH42 304 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 LRTOMTQ8WZ04 291 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 FBXW5Q969U6 566 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 BOD1Q96IK1 185 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 RAB3IPQ96QF0 476 aaPredicted RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 NMNAT3Q96T66 252 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 TMEM204Q9BSN7 226 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 TSSK6Q9BXA6 273 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 SEMA6AQ9H2E6 1030 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 FN3KQ9H479 309 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 RNF121Q9H920 327 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF556Q9HAH1 456 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 SMURF2Q9HAU4 748 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF224Q9NZL3 707 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 MOKQ9UQ07 419 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 UGT2A1Q9Y4X1 527 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ATP23Q9Y6H3 246 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ACANP16112 2415 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ARRDC5A6NEK1 342 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ENTPD5O75356 428 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 UBL3O95164 117 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ATE1O95260 518 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 IGKV3-15P01624 115 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 CRYAAP02489 173 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ZNF23P17027 643 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 CD53P19397 219 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 FASP25445 335 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ARR3P36575 388 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 CDKN2AP42771 156 aaKnown RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 ACTR3P61158 418 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 RAB1AP62820 205 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 TAGLNQ01995 201 aaKnown RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 GK3PQ14409 553 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 RAB39AQ14964 217 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 ATP6AP1Q15904 470 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 SLC36A2Q495M3 483 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 OTPQ5XKR4 325 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 SHQ1Q6PI26 577 aaKnown RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 SLC25A47Q6Q0C1 308 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 B3GLCTQ6Y288 498 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 RASSF6Q6ZTQ3 369 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 AMIGO2Q86SJ2 522 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 CCDC36Q8IYA8 594 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 IQCF1Q8N6M8 205 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 CYB561A3Q8NBI2 242 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 OR52E2Q8NGJ4 325 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 LILRB1Q8NHL6 650 aaPredicted RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 FGFBP3Q8TAT2 258 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 TEX47Q8TBZ9 253 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 FNDC8Q8TC99 324 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 NABP1Q96AH0 204 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 NMD3Q96D46 503 aaKnown RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 TSSK2Q96PF2 358 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 KCNN2Q9H2S1 579 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 NTN4Q9HB63 628 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 EMC7Q9NPA0 242 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 CCNB1IP1Q9NPC3 277 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 RPRD1BQ9NQG5 326 aaKnown RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 CISD1Q9NZ45 108 aaKnown RBP6□□□□□ -1.45
BRCA1-215ENST00000478531 EDARQ9UNE0 448 aa6□□□□□ -1.45
BRCA1-215ENST00000478531 PRRC2AP48634 2157 aaKnown RBP5.99□□□□□ -1.45
BRCA1-215ENST00000478531 F8P00451 2351 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 BHLHE40O14503 412 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 GPANK1O95872 356 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 TXNDC12O95881 172 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 RENP00797 406 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 IGLV1-44P01699 117 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 FCGR1AP12314 374 aa5.99□□□□□ -1.45
BRCA1-215ENST00000478531 CBR1P16152 277 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms