RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 KRTAP3-1Q9BYR8 98 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ACTR6Q9GZN1 396 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 LAT2Q9GZY6 243 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 RAB33BQ9H082 229 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SLITRK2Q9H156 845 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 MED28Q9H204 178 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 PLEKHA1Q9HB21 404 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 GALNT9Q9HCQ5 603 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 PDE7BQ9NP56 450 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ACOXLQ9NUZ1 547 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 MCUBQ9NWR8 336 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SOHLH2Q9NX45 425 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 STMN3Q9NZ72 180 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 EMC3Q9P0I2 261 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ING4Q9UNL4 249 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 COPS3Q9UNS2 423 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 DTX4Q9Y2E6 619 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 SIT1Q9Y3P8 196 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 ADAM18Q9Y3Q7 739 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 PCDHGA9Q9Y5G4 932 aaKnown RBP4.47□□□□□ -1.69
SF3B6-202ENST00000478050 CLDN16Q9Y5I7 305 aa4.47□□□□□ -1.69
SF3B6-202ENST00000478050 PCNX3Q9H6A9 2034 aa4.46□□□□□ -1.69
SF3B6-202ENST00000478050 DOPEY2Q9Y3R5 2298 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 RP1P56715 2156 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 FER1L5A0AVI2 2057 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 A0A0A6YYJ9 748 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 TEX13CA0A0J9YWL9 993 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 A0A1B0GVI7 797 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 A0A1W2PQD3 144 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 OR6C68A6NDL8 312 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 NAP1L6A6NFF2 107 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 FRG2CA6NGY1 282 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 C17orf105B2RV13 164 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 GABARAPH6UMI1 98 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 AIPO00170 330 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 LANCL1O43813 399 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 EIF4E2O60573 245 aaKnown RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CDC123O75794 336 aaPredicted RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 OR2B3O76000 313 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 UTS2O95399 124 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 TCRBP04435 133 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 AMY2AP04746 511 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 HIST1H2ABP04908 130 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 RAB40ALP0C0E4 278 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ASAH2BP0C7U1 165 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CALCBP10092 127 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 TFPIP10646 304 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ANXA3P12429 323 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 SRMP19623 302 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 AMY2BP19961 511 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 MAOAP21397 527 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CD27P26842 260 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CD38P28907 300 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CD1CP29017 333 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 SDHAP31040 664 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 UQCRC1P31930 480 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 BTCP35070 178 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 PSMB10P40306 273 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 AQP2P41181 271 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 MNDAP41218 407 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CENPAP49450 140 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 PPM1FP49593 454 aaPredicted RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CCR4P51679 360 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 AGFG1P52594 562 aaKnown RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 HCCSP53701 268 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 SLC37A1P57057 533 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 AP3S2P59780 193 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CTXN1P60606 82 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 DGCR2P98153 550 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 SKP2Q13309 424 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 TDGQ13569 410 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ALKBH1Q13686 389 aaKnown RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 KLF9Q13886 244 aaPredicted RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ERV3-1Q14264 604 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 NNATQ16517 81 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 LPAL2Q16609 132 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 BTBD16Q32M84 506 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 NDUFAF6Q330K2 333 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 SLC36A2Q495M3 483 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ALG10Q5BKT4 473 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF684Q5T5D7 378 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 BCL2L15Q5TBC7 163 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 LRRN1Q6UXK5 716 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ZNF782Q6ZMW2 699 aaPredicted RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 CREB3L2Q70SY1 520 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 HIST3H2AQ7L7L0 130 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 KRT74Q7RTS7 529 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 FAM122BQ7Z309 247 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 NANOGNBQ7Z5D8 188 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 LUZP2Q86TE4 346 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 C17orf82Q86X59 251 aaPredicted RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 SIAH3Q8IW03 269 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 C10orf53Q8N6V4 93 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 ZBTB44Q8NCP5 570 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 LSM14AQ8ND56 463 aaKnown RBP4.46□□□□□ -1.7
SF3B6-202ENST00000478050 TSTD1Q8NFU3 115 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 OR51L1Q8NGJ5 315 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 OR6K6Q8NGW6 343 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 OR2T4Q8NH00 348 aa4.46□□□□□ -1.7
SF3B6-202ENST00000478050 OR4C3Q8NH37 302 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms