RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 TMEM5Q9Y2B1 443 aa11.89□□□□□ -0.51
HDAC7-222ENST00000477937 ARL2BPQ9Y2Y0 163 aa11.89□□□□□ -0.51
HDAC7-222ENST00000477937 A0A1W2PRQ8 180 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 A8MV72 311 aaPredicted RBP11.88□□□□□ -0.51
HDAC7-222ENST00000477937 M0R233 179 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 H1F0P07305 194 aaKnown RBP11.88□□□□□ -0.51
HDAC7-222ENST00000477937 CCL2P13500 99 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 DAOP14920 347 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 RHCEP18577 417 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 APLNRP35414 380 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 GPR4P46093 362 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 HSF2Q03933 536 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 DGCR6Q14129 220 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 GGTLC2Q14390 218 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 MSMPQ1L6U9 139 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 IQCCQ4KMZ1 466 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 CYB5R2Q6BCY4 276 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 RGS7BPQ6MZT1 257 aaPredicted RBP11.88□□□□□ -0.51
HDAC7-222ENST00000477937 TSEN54Q7Z6J9 526 aaKnown RBP11.88□□□□□ -0.51
HDAC7-222ENST00000477937 PIGWQ7Z7B1 504 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 RNF148Q8N7C7 305 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 ZNF519Q8TB69 540 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 SLC7A13Q8TCU3 470 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 UBASH3BQ8TF42 649 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 NSMAFQ92636 917 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 SYT3Q9BQG1 590 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 MS4A5Q9H3V2 200 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 GORASP2Q9H8Y8 452 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 NDUFAF4Q9P032 175 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 REV1Q9UBZ9 1251 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 DUSP13Q9UII6 198 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 UGT2A1Q9Y4X1 527 aa11.88□□□□□ -0.51
HDAC7-222ENST00000477937 IGKV1D-43A0A0B4J1Z2 117 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 CDC42EP2O14613 210 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 DCTN3O75935 186 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 STAMBPO95630 424 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 SNAP29O95721 258 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 MMP7P09237 267 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-222ENST00000477937 FAM157BP0CG42 384 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 TCN1P20061 433 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-222ENST00000477937 RPL4P36578 427 aaKnown RBP11.87□□□□□ -0.51
HDAC7-222ENST00000477937 RAD52P43351 418 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 SELENOVP59797 346 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 FHL1Q13642 323 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 KRT72Q14CN4 511 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 FGD3Q5JSP0 725 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 SAMD4BQ5PRF9 694 aaKnown RBP11.87□□□□□ -0.51
HDAC7-222ENST00000477937 C6orf52Q5T4I8 152 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 FAM27BQ5VT28 67 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 PODNL1Q6PEZ8 512 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 HIPK1Q86Z02 1210 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 PGAM4Q8N0Y7 254 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 ARIH2OSQ8N7S6 290 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 FAM156AQ8NDB6 213 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 NABP1Q96AH0 204 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 C7orf34Q96L11 122 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 TSPAN32Q96QS1 320 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 GRHPRQ9UBQ7 328 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 TAGLN3Q9UI15 199 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 MAGEL2Q9UJ55 1249 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 FZR1Q9UM11 496 aa11.87□□□□□ -0.51
HDAC7-222ENST00000477937 MALRD1Q5VYJ5 2156 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 LCKP06239 509 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 CD14P08571 375 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 IGFBP1P08833 259 aaPredicted RBP11.86□□□□□ -0.51
HDAC7-222ENST00000477937 IGHV4-31P0DP07 118 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 APEHP13798 732 aaKnown RBP11.86□□□□□ -0.51
HDAC7-222ENST00000477937 HSD17B1P14061 328 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 ZNF32P17041 273 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 ITGA2P17301 1181 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 STOMP27105 288 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 GIFP27352 417 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 APEX1P27695 318 aaKnown RBP11.86□□□□□ -0.51
HDAC7-222ENST00000477937 GZMKP49863 264 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 UCP2P55851 309 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 PCBD1P61457 104 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 ERVK-25P63136 954 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 PABPC1L2AQ5JQF8 200 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 ZNF786Q8N393 782 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 PAQR4Q8N4S7 273 aaPredicted RBP11.86□□□□□ -0.51
HDAC7-222ENST00000477937 FAM86B1Q8N7N1 296 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 CLDN22Q8N7P3 220 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 C11orf40Q8WZ69 217 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 PYURFQ96I23 114 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 FAM46AQ96IP4 442 aaKnown RBP11.86□□□□□ -0.51
HDAC7-222ENST00000477937 CDRT15Q96T59 188 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 BCL2L14Q9BZR8 327 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 BPESC1Q9GZL8 116 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 TPK1Q9H3S4 243 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 KRCC1Q9NPI7 259 aaPredicted RBP11.86□□□□□ -0.51
HDAC7-222ENST00000477937 ARL8BQ9NVJ2 186 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 NDE1Q9NXR1 346 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 MYEF2Q9P2K5 600 aaKnown RBP11.86□□□□□ -0.51
HDAC7-222ENST00000477937 GPR160Q9UJ42 338 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 ADAM18Q9Y3Q7 739 aa11.86□□□□□ -0.51
HDAC7-222ENST00000477937 A0A1W2PPL8 197 aa11.85□□□□□ -0.51
HDAC7-222ENST00000477937 A0A1W2PPW3 197 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms