RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 A6NIN4 97 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 NPC1O15118 1278 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 NARSO43776 548 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 DFFBO76075 338 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 PNPP00491 289 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 CATP04040 527 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 CD14P08571 375 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 IFNGR2P38484 337 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 GIPRP48546 466 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 VAMP2P63027 116 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 REEP5Q00765 189 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 TSPAN31Q12999 210 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 MEF2DQ14814 521 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 ODF4Q2M2E3 257 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 C2orf68Q2NKX9 166 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 TRIM61Q5EBN2 209 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 RNASE12Q5GAN4 147 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 GGNBP1Q5YKI7 109 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 C11orf87Q6NUJ2 197 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 FAHD2BQ6P2I3 314 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 SLC22A25Q6T423 547 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 LHFPL4Q7Z7J7 247 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 OR52J3Q8NH60 311 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 TNFAIP8L1Q8WVP5 186 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 FAHD2AQ96GK7 314 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 ALKBH3Q96Q83 286 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 DNAJC4Q9NNZ3 241 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 ACER3Q9NUN7 267 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 CHRNA9Q9UGM1 479 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 SLCO1B1Q9Y6L6 691 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 DOCK8Q8NF50 2099 aa11.53□□□□□ -0.56
RTFDC1-207ENST00000477573 CD8B2A6NJW9 211 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 LOC730098B7Z3J9 87 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 LINC01565O15544 149 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 SPINT1O43278 529 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 TSPAN6O43657 245 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 OR5AC1P0C628 307 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 CD8BP10966 210 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 AKR1C3P42330 323 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 OR10A3P58181 314 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 UBE2V2Q15819 145 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 SYT14P1Q58G82 188 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 EOGTQ5NDL2 527 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 PRAMEF8Q5VWM4 474 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 PRAMEF7Q5VXH5 474 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 ADNP2Q6IQ32 1131 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 TMEM220Q6QAJ8 160 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 TCEANCQ8N8B7 351 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 CMBLQ96DG6 245 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 SLC41A3Q96GZ6 507 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 KIRREL1Q96J84 757 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 MYADMQ96S97 322 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 KXD1Q9BQD3 176 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 TRMT61BQ9BVS5 477 aaKnown RBP11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 PRSS16Q9NQE7 514 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 WIF1Q9Y5W5 379 aa11.52□□□□□ -0.56
RTFDC1-207ENST00000477573 ANKRD20A5PA0PJZ0 165 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 ANKRD61A6NGH8 418 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 LIMS3P0CW19 117 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 LIMS4P0CW20 117 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 LAMP2P13473 410 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 CELP19835 753 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 SDHBP21912 280 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 BCKDHBP21953 392 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 DLSTP36957 453 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 CASRP41180 1078 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 SLC6A12P48065 614 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 HTR6P50406 440 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 ABRAXAS2Q15018 415 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 ATP6V1FQ16864 119 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 GGTA1PQ4G0N0 100 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 ZNF770Q6IQ21 691 aaPredicted RBP11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 MEX3BQ6ZN04 569 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 BEST3Q8N1M1 668 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 OR5AP2Q8NGF4 316 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 OR10R2Q8NGX6 335 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 DIRC2Q96SL1 478 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 HIST1H2BLQ99880 126 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 PLA2G2FQ9BZM2 168 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 RGCCQ9H4X1 137 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 MYOTQ9UBF9 498 aa11.52□□□□□ -0.57
RTFDC1-207ENST00000477573 A0A087WZY1 265 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 C20orf202A1L168 122 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 FAM221AA4D161 298 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 A6NNC1 897 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 TMEM229AB2RXF0 380 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 GASTP01350 101 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 ATP1B1P05026 303 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 ASGR2P07307 311 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CHRM4P08173 479 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 FAM157CP0CG43 387 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 VSIG10L2P0DP72 767 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CEACAM8P31997 349 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 P2RY2P41231 377 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 METAP1P53582 386 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 CRYBA2P53672 197 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 PCBP4P57723 403 aaKnown RBP11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 KRTCAP3Q53RY4 240 aa11.51□□□□□ -0.57
RTFDC1-207ENST00000477573 KIAA1211LQ6NV74 962 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms