RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 C19orf84I3L1E1 186 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 SEC14L5O43304 696 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 CXCL13O43927 109 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 GMFGO60234 142 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 CYTIPO60759 359 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 NUDT14O95848 222 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 IGF2P01344 180 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 OPN1SWP03999 348 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 SEMG1P04279 462 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 GKN3PP0CG01 181 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 GP1BBP13224 206 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 GGT1P19440 569 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 KLK2P20151 261 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 CALB2P22676 271 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 TCEA1P23193 301 aaKnown RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 ME2P23368 584 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 HTR1EP28566 365 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 AGTR1P30556 359 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 CCKARP32238 428 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 KDELR2P33947 212 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 RYKP34925 604 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 IDH2P48735 452 aaKnown RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 RPS6KA3P51812 740 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 RPS3AP61247 264 aaKnown RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 PSME3P61289 254 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 SORDQ00796 357 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 MERTKQ12866 999 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 MYBPHQ13203 477 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 PDK3Q15120 406 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 IQCCQ4KMZ1 466 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 CYBRD1Q53TN4 286 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 ENTPD8Q5MY95 495 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 PXDC1Q5TGL8 231 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 ASPHD1Q5U4P2 390 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 EEF1A1P5Q5VTE0 462 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 HBMQ6B0K9 141 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 ZNF613Q6PF04 617 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 PLXDC2Q6UX71 529 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 WDR88Q6ZMY6 472 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 TMPPEQ6ZT21 453 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 C1QL2Q7Z5L3 287 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 TSEN54Q7Z6J9 526 aaKnown RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 UBQLNLQ8IYU4 475 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 SMYD1Q8NB12 490 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 OR6S1Q8NH40 331 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 DNAJA4Q8WW22 397 aaPredicted RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 RASSF5Q8WWW0 418 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 SLC38A4Q969I6 547 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 STARD4Q96DR4 205 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 SLC41A3Q96GZ6 507 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 GMPPAQ96IJ6 420 aaPredicted RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 ECSITQ9BQ95 431 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 PSD2Q9BQI7 771 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 PRSS27Q9BQR3 290 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 TMEM43Q9BTV4 400 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 POTEKPQ9BYX7 375 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 OR11A1Q9GZK7 315 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 POLR2J2Q9GZM3 115 aaKnown RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 POLR2J3Q9H1A7 115 aaKnown RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 C1orf21Q9H246 121 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 ARMC7Q9H6L4 198 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 TMEM185BQ9H7F4 350 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 GORASP2Q9H8Y8 452 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 FANCFQ9NPI8 374 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 GLRX2Q9NS18 164 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 RASSF1Q9NS23 344 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 COQ3Q9NZJ6 369 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 TMED7Q9Y3B3 224 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 SPIN1Q9Y657 262 aaPredicted RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 RAI1Q7Z5J4 1906 aaPredicted RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 ANKRD17O75179 2603 aaKnown RBP4.6□□□□□ -1.67
VPS45-207ENST00000477558 PLCE1Q9P212 2302 aa4.6□□□□□ -1.67
VPS45-207ENST00000477558 AKAP6Q13023 2319 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 LOC102725191A0A1B0GVB3 256 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 A0A1W2PRQ8 180 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 LIPT2A6NK58 231 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 ZNF724A8MTY0 619 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 A8MVM7 634 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 A8MXE2 369 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 CHP2O43745 196 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 TSPAN19P0C672 248 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 THRBP10828 461 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 PNMTP11086 282 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 SFTPDP35247 375 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 ASCL1P50553 236 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 MNAT1P51948 309 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 CARD18P57730 90 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 RGS8P57771 180 aaPredicted RBP4.59□□□□□ -1.67
VPS45-207ENST00000477558 CSNK2A1P68400 391 aaPredicted RBP4.59□□□□□ -1.67
VPS45-207ENST00000477558 HOXC5Q00444 222 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 SRYQ05066 204 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 CEACAM7Q14002 265 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 RNPS1Q15287 305 aaKnown RBP4.59□□□□□ -1.67
VPS45-207ENST00000477558 TMEM176BQ3YBM2 270 aaPredicted RBP4.59□□□□□ -1.67
VPS45-207ENST00000477558 SAMD4BQ5PRF9 694 aaKnown RBP4.59□□□□□ -1.67
VPS45-207ENST00000477558 PDSS1Q5T2R2 415 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 ULK3Q6PHR2 472 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 PAQR6Q6TCH4 344 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 C5orf46Q6UWT4 87 aa4.59□□□□□ -1.67
VPS45-207ENST00000477558 NHLRC1Q6VVB1 395 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms