RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SRSF4Q08170 494 aaKnown RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF154Q13106 437 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 FADDQ13158 208 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SCARB2Q14108 478 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 TAF11Q15544 211 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC9A3R2Q15599 337 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SGCAQ16586 387 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ESCO2Q56NI9 601 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ZMAT1Q5H9K5 638 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 PABPC1L2AQ5JQF8 200 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 FAM209AQ5JX71 171 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 REEP3Q6NUK4 255 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 TTC33Q6PID6 262 aaPredicted RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 LRFN4Q6PJG9 635 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 UNQ6126/PRO20091Q6UXV3 157 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 DPPA2Q7Z7J5 298 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ARMC8Q8IUR7 673 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF101Q8IZC7 436 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 PARP8Q8N3A8 854 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SPICQ8N5J4 248 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SMYD1Q8NB12 490 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 DEFB108BQ8NET1 73 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 OR52E2Q8NGJ4 325 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 OR6S1Q8NH40 331 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 OR6X1Q8NH79 312 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 AKR7LQ8NHP1 331 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 VANGL1Q8TAA9 524 aaPredicted RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 NSMAFQ92636 917 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 TMIGD2Q96BF3 282 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 LRRC58Q96CX6 371 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC25A44Q96H78 314 aaPredicted RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 C1orf147Q96MC9 270 aaPredicted RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF48Q96MX3 618 aaPredicted RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF347Q96SE7 839 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 DIRC2Q96SL1 478 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 MCHR1Q99705 422 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 PKP2Q99959 881 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 TMEM43Q9BTV4 400 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC19A3Q9BZV2 496 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 OR2J1Q9GZK6 312 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 NANOGQ9H9S0 305 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 BCL2L10Q9HD36 194 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 NPHS2Q9NP85 383 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 TCF7L2Q9NQB0 619 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 NANSQ9NR45 359 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 DCAF16Q9NXF7 216 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 EGFL7Q9UHF1 273 aa5.65□□□□□ -1.5
RTFDC1-206ENST00000477485 A0A1W2PRG6 482 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 TRAPPC2LH3BP13 241 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 M0QZ24 198 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 HOXA3O43365 443 aaPredicted RBP5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 FZD7O75084 574 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 SERPINB7O75635 380 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 UBOX5O94941 541 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 MFN2O95140 757 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 SLC2A10O95528 541 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 OPN1SWP03999 348 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 F13BP05160 661 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 PGA4P0DJD7 388 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 PGA3P0DJD8 388 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 IGHV4-38-2P0DP08 117 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 ZNF32P17041 273 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 TNFSF4P23510 183 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 CDAP32320 146 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 ARHGDIAP52565 204 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 STX1BP61266 288 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 PPP1CBP62140 327 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 VSNL1P62760 191 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 ERVK-25P63136 954 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 CD47Q08722 323 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 ZNF74Q16587 644 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 SPRNQ5BIV9 151 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 KLF17Q5JT82 389 aaPredicted RBP5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 ENTPD8Q5MY95 495 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 DHRS4L2Q6PKH6 230 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 BTNL3Q6UXE8 466 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 MSANTD1Q6ZTZ1 278 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 RFPL4BQ6ZWI9 263 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 C1QL4Q86Z23 238 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 KIR3DL3Q8N743 410 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 NOXO1Q8NFA2 376 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 OR2Z1Q8NG97 314 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 KLF14Q8TD94 323 aaPredicted RBP5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 MCHR2Q969V1 340 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 ARHGDIGQ99819 225 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 PAIP1Q9H074 479 aaKnown RBP5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 SLITRK2Q9H156 845 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 CYSLTR2Q9NS75 346 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 TMEM106BQ9NUM4 274 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 ZIM2Q9NZV7 527 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 HAO1Q9UJM8 370 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 ZDHHC8Q9ULC8 765 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 SLC7A7Q9UM01 511 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 INSIG2Q9Y5U4 225 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 SOX21Q9Y651 276 aaPredicted RBP5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 VWFP04275 2813 aa5.64□□□□□ -1.51
RTFDC1-206ENST00000477485 A0A1W2PPL8 197 aa5.63□□□□□ -1.51
RTFDC1-206ENST00000477485 EVPLLA8MZ36 301 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms