RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 RTN4RQ9BZR6 473 aa6.99□□□□□ -1.29
RBM39-230ENST00000476806 NUAK2Q9H093 628 aa6.99□□□□□ -1.29
RBM39-230ENST00000476806 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.99□□□□□ -1.29
RBM39-230ENST00000476806 SYT4Q9H2B2 425 aa6.99□□□□□ -1.29
RBM39-230ENST00000476806 ZNF703Q9H7S9 590 aaPredicted RBP6.99□□□□□ -1.29
RBM39-230ENST00000476806 RNF122Q9H9V4 155 aa6.99□□□□□ -1.29
RBM39-230ENST00000476806 PLGRKTQ9HBL7 147 aa6.99□□□□□ -1.29
RBM39-230ENST00000476806 NEK6Q9HC98 313 aa6.99□□□□□ -1.29
RBM39-230ENST00000476806 FBXL2Q9UKC9 423 aa6.99□□□□□ -1.29
RBM39-230ENST00000476806 POLR1DQ9Y2S0 133 aa6.99□□□□□ -1.29
RBM39-230ENST00000476806 PCDHGA9Q9Y5G4 932 aaKnown RBP6.99□□□□□ -1.29
RBM39-230ENST00000476806 TENM4Q6N022 2769 aa6.99□□□□□ -1.29
RBM39-230ENST00000476806 A0A1W2PPW3 197 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 A0A1W2PQL4 384 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 ZC3H12DA2A288 527 aaKnown RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 OR6C68A6NDL8 312 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ACOD1A6NK06 481 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 CASKO14936 926 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 SLC16A7O60669 478 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ZNF354AO60765 605 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 SLC43A1O75387 559 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 TRAPPC6AO75865 159 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ATE1O95260 518 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 FARS2O95363 451 aaKnown RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 SLC2A10O95528 541 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 IFNGR1P15260 489 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ZNF182P17025 639 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 GADD45AP24522 165 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 PTBP1P26599 531 aaKnown RBP eCLIP6.98□□□□□ -1.29
RBM39-230ENST00000476806 CD40LGP29965 261 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 SFTPDP35247 375 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 CD96P40200 585 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 PEX19P40855 299 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 CDKN2AP42771 156 aaKnown RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 CCR9P51686 369 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 CARD18P57730 90 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 PCBD1P61457 104 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 LSM6P62312 80 aaKnown RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 SIRPAP78324 504 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ADAM8P78325 824 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 H3F3AP84243 136 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ROM1Q03395 351 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 PIGFQ07326 219 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 CDK5R1Q15078 307 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 FAM189A2Q15884 450 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 C1QTNF12Q5T7M4 302 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 B3GNTL1Q67FW5 361 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 HBMQ6B0K9 141 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 IGFL2Q6UWQ7 119 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 C20orf204Q6ZNR8 217 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 C16orf47Q6ZP98 133 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 GPAT4Q86UL3 456 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 LHFPL3Q86UP9 236 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 IGFN1Q86VF2 1251 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 MEX3DQ86XN8 651 aaKnown RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 CDC20BQ86Y33 519 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 MCEMP1Q8IX19 187 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 TIGD4Q8IY51 512 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ZNF679Q8IYX0 411 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ZADH2Q8N4Q0 377 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ZFP62Q8NB50 900 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 MINDY2Q8NBR6 621 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 FAM83FQ8NEG4 500 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 OR2V1Q8NHB1 315 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 MCFD2Q8NI22 146 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 NEIL3Q8TAT5 605 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 POC1BQ8TC44 478 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 DYNC2LI1Q8TCX1 351 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 C15orf40Q8WUR7 153 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ZMYND19Q96E35 227 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 SCMH1Q96GD3 660 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ARL5BQ96KC2 179 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 C4orf36Q96KX1 117 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 GNRHR2Q96P88 292 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 BBC3Q96PG8 261 aaPredicted RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 OR11A1Q9GZK7 315 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 C1orf198Q9H425 327 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 MOV10Q9HCE1 1003 aaKnown RBP6.98□□□□□ -1.29
RBM39-230ENST00000476806 GALNT8Q9NY28 637 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 CKLFQ9UBR5 152 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 ZNF391Q9UJN7 358 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 GNG8Q9UK08 70 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 B9D1Q9UPM9 204 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 B3GNT3Q9Y2A9 372 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 IGSF10Q6WRI0 2623 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 KNTC1P50748 2209 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 CPAMD8Q8IZJ3 1885 aa6.98□□□□□ -1.29
RBM39-230ENST00000476806 HELZ2Q9BYK8 2649 aaKnown RBP6.97□□□□□ -1.29
RBM39-230ENST00000476806 KIF26BQ2KJY2 2108 aa6.97□□□□□ -1.29
RBM39-230ENST00000476806 TRAV1-2A0A0B4J238 106 aa6.97□□□□□ -1.29
RBM39-230ENST00000476806 TRBV2A0A0J9YWF9 115 aa6.97□□□□□ -1.29
RBM39-230ENST00000476806 A0A1W2PNU3 283 aaPredicted RBP6.97□□□□□ -1.29
RBM39-230ENST00000476806 ISPDA4D126 451 aa6.97□□□□□ -1.29
RBM39-230ENST00000476806 ARGFXA6NJG6 315 aa6.97□□□□□ -1.29
RBM39-230ENST00000476806 LRRN3E7EW58 273 aa6.97□□□□□ -1.29
RBM39-230ENST00000476806 LOC110117498-PIK3R3F6TDL0 507 aa6.97□□□□□ -1.29
RBM39-230ENST00000476806 J3QLW9 94 aa6.97□□□□□ -1.29
RBM39-230ENST00000476806 OGG1O15527 345 aa6.97□□□□□ -1.29
RBM39-230ENST00000476806 RRP8O43159 456 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms