RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 KRR1Q13601 381 aaKnown RBP8.42□□□□□ -1.06
HDAC3-208ENST00000476739 TESK1Q15569 626 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 GSG1Q2KHT4 349 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 DEFB113Q30KQ7 82 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 CLEC12AQ5QGZ9 265 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 THEM4Q5T1C6 240 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 OTPQ5XKR4 325 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 FAM205BPQ63HN1 556 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 C20orf204Q6ZNR8 217 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 HDDC2Q7Z4H3 204 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF584Q8IVC4 421 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 LRRC18Q8N456 261 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF611Q8N823 705 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 OR10G2Q8NGC3 310 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 POP5Q969H6 163 aaKnown RBP8.42□□□□□ -1.06
HDAC3-208ENST00000476739 FBXW5Q969U6 566 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 RADILQ96JH8 1075 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF570Q96NI8 536 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 ERMAPQ96PL5 475 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-208ENST00000476739 RBP7Q96R05 134 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 CCL19Q99731 98 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 MMADHCQ9H3L0 296 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-208ENST00000476739 NTN4Q9HB63 628 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 STX18Q9P2W9 335 aaKnown RBP8.42□□□□□ -1.06
HDAC3-208ENST00000476739 LAMP3Q9UQV4 416 aa8.42□□□□□ -1.06
HDAC3-208ENST00000476739 TACC2O95359 2948 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 LRBAP50851 2863 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 TEX15Q9BXT5 2789 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 PRSS37A4D1T9 235 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 DCTN6O00399 190 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 BHLHE40O14503 412 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 GNGT2O14610 69 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 SOX14O95416 240 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 GPANK1O95872 356 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 TXNDC12O95881 172 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 CD8AP01732 235 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 OR8G3PP0DMU2 310 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 HIST1H1CP16403 213 aaKnown RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF14P17017 642 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 PRKACGP22612 351 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 ARR3P36575 388 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF84P51523 738 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 ART1P52961 327 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 RAB1AP62820 205 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 MRPS34P82930 218 aaKnown RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 HGFACQ04756 655 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 RAB39AQ14964 217 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 KPNB1Q14974 876 aaKnown RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 SGCAQ16586 387 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 CCDC92Q53HC0 331 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 C1orf146Q5VVC0 180 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 GPR139Q6DWJ6 353 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 UGT2A3Q6UWM9 527 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 LINC00471Q8N535 108 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 FAM169BQ8N8A8 192 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 OR4Q3Q8NH05 313 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 OR4K13Q8NH42 304 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 GIPC3Q8TF64 312 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 SMAP2Q8WU79 429 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 MBD6Q96DN6 1003 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 FBXO17Q96EF6 278 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 TSSK2Q96PF2 358 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 NMNAT3Q96T66 252 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 FEVQ99581 238 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 IFT27Q9BW83 186 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 DGCR6LQ9BY27 220 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 SYT4Q9H2B2 425 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 FN3KQ9H479 309 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 DENND2DQ9H6A0 471 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 SMURF2Q9HAU4 748 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 ARMC1Q9NVT9 282 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 IL20Q9NYY1 176 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 VSX1Q9NZR4 365 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 PDP1Q9P0J1 537 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 PAIP2BQ9ULR5 123 aaKnown RBP8.41□□□□□ -1.06
HDAC3-208ENST00000476739 MGAT4BQ9UQ53 548 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 ATP23Q9Y6H3 246 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 CDH10Q9Y6N8 788 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 MYO9AB2RTY4 2548 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 CCDC168Q8NDH2 2452 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 CREBBPQ92793 2442 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 PLCE1Q9P212 2302 aa8.41□□□□□ -1.06
HDAC3-208ENST00000476739 USF3Q68DE3 2245 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 RTTNQ86VV8 2226 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 IGHV2OR16-5A0A0B4J2B6 119 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 A0A1W2PPL8 197 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 XKRYO14609 159 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 ARPC3O15145 178 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 SLC16A7O60669 478 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 UBL3O95164 117 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 MPZL1O95297 269 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 FARS2O95363 451 aaKnown RBP8.4□□□□□ -1.06
HDAC3-208ENST00000476739 MMP7P09237 267 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-208ENST00000476739 CCL2P13500 99 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 APEHP13798 732 aaKnown RBP8.4□□□□□ -1.06
HDAC3-208ENST00000476739 ZNF32P17041 273 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 LAP3P28838 519 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 SLC6A6P31641 620 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 CDKN1AP38936 164 aa8.4□□□□□ -1.06
HDAC3-208ENST00000476739 ENDOGQ14249 297 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms