RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 EFL1Q7Z2Z2 1120 aaKnown RBP3.1□□□□□ -1.91
PTCD3-211ENST00000476215 PIANPQ8IYJ0 282 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 ZNF679Q8IYX0 411 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 BHLHE23Q8NDY6 225 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 DUSP18Q8NEJ0 188 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 TRPV1Q8NER1 839 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 OR1L4Q8NGR5 311 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 MCOLN3Q8TDD5 553 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 FGF14Q92915 247 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 TCEANC2Q96MN5 208 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 SLC39A3Q9BRY0 314 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 GON7Q9BXV9 100 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 NMRAL1Q9HBL8 299 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 MRPL47Q9HD33 250 aaKnown RBP3.1□□□□□ -1.91
PTCD3-211ENST00000476215 GNPTGQ9UJJ9 305 aa3.1□□□□□ -1.91
PTCD3-211ENST00000476215 IGLV3-22A0A075B6J6 115 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 ANKRD63C9JTQ0 380 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 SLC31A2O15432 143 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 SURF6O75683 361 aaKnown RBP3.09□□□□□ -1.91
PTCD3-211ENST00000476215 TSPAN12O95859 305 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 PLEKP08567 350 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-211ENST00000476215 CD1CP29017 333 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 HOXA9P31269 272 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 CRISP3P54108 245 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 HERVK_113P61574 105 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 IMMTQ16891 758 aaKnown RBP3.09□□□□□ -1.91
PTCD3-211ENST00000476215 DEFB115Q30KQ5 88 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 TFDP3Q5H9I0 405 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 TSPO2Q5TGU0 170 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 CST9Q5W186 159 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 CENPPQ6IPU0 288 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 CNIH2Q6PI25 160 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 USP50Q70EL3 339 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-211ENST00000476215 LINC01551Q86U37 167 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 ZCCHC7Q8N3Z6 543 aaKnown RBP3.09□□□□□ -1.91
PTCD3-211ENST00000476215 EIF1ADQ8N9N8 165 aaKnown RBP3.09□□□□□ -1.91
PTCD3-211ENST00000476215 SMARCD2Q92925 531 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 PANX2Q96RD6 677 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 FMO2Q99518 471 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 PLA2G2FQ9BZM2 168 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 LRRC40Q9H9A6 602 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 SGK2Q9HBY8 427 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 DMAP1Q9NPF5 467 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-211ENST00000476215 ZNF226Q9NYT6 803 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 SPATA7Q9P0W8 599 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 PCYOX1Q9UHG3 505 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 N6AMT1Q9Y5N5 214 aa3.09□□□□□ -1.91
PTCD3-211ENST00000476215 ABCC12Q96J65 1359 aa3.09□□□□□ -1.92
PTCD3-211ENST00000476215 IBTKQ9P2D0 1353 aaPredicted RBP3.09□□□□□ -1.92
PTCD3-211ENST00000476215 ANKRD31Q8N7Z5 1873 aa3.09□□□□□ -1.92
PTCD3-211ENST00000476215 RIC1Q4ADV7 1423 aa3.09□□□□□ -1.92
PTCD3-211ENST00000476215 VIRMAQ69YN4 1812 aaKnown RBP3.08□□□□□ -1.92
PTCD3-211ENST00000476215 FER1L6Q2WGJ9 1857 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 CCDC88AQ3V6T2 1871 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-211ENST00000476215 BTBD17A6NE02 478 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 C11orf94C9JXX5 98 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 SNAI2O43623 268 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 DFNA5O60443 496 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 FCMRO60667 390 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 SUPT3HO75486 399 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 GKN3PP0CG01 181 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 TCN1P20061 433 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-211ENST00000476215 SEC61GP60059 68 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 SMARCB1Q12824 385 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 MRPL28Q13084 256 aaKnown RBP3.08□□□□□ -1.92
PTCD3-211ENST00000476215 DGUOKQ16854 277 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 LRRC31Q6UY01 552 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 TPRX1Q8N7U7 411 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 VN1R2Q8NFZ6 395 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 OR2G3Q8NGZ4 309 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 STARD4Q96DR4 205 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 MS4A4EQ96PG1 132 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 ECSITQ9BQ95 431 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 SLC17A9Q9BYT1 436 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 VCXQ9H320 206 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 CDC42EP4Q9H3Q1 356 aaKnown RBP3.08□□□□□ -1.92
PTCD3-211ENST00000476215 NIPAL2Q9H841 368 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 ADAP2Q9NPF8 381 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 XCL2Q9UBD3 114 aa3.08□□□□□ -1.92
PTCD3-211ENST00000476215 WDR90Q96KV7 1748 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 A0A096LNJ9 63 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 CLRN2A0PK11 232 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 HAS3O00219 553 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 PEX7O00628 323 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 OR7A10O76100 309 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 IGKV5-2P06315 115 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 CSF3P09919 207 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 RPS2P15880 293 aaKnown RBP3.07□□□□□ -1.92
PTCD3-211ENST00000476215 CNR1P21554 472 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 RORAP35398 523 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 FDFT1P37268 417 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 PAX5Q02548 391 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 MADCAM1Q13477 382 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 EBI3Q14213 229 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 FZD2Q14332 565 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 SGCAQ16586 387 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 TMEM183BQ1AE95 376 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 TRIM40Q6P9F5 258 aa3.07□□□□□ -1.92
PTCD3-211ENST00000476215 TGIF2LXQ8IUE1 241 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms