RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 THRSPQ92748 146 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 PHF21AQ96BD5 680 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 CLIP3Q96DZ5 547 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 ZMYND19Q96E35 227 aaPredicted RBP6.2□□□□□ -1.42
UBR4-212ENST00000475973 S100A16Q96FQ6 103 aaKnown RBP6.2□□□□□ -1.42
UBR4-212ENST00000475973 DMRTA2Q96SC8 542 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 DPYSL5Q9BPU6 564 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 PDCD1LG2Q9BQ51 273 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 PPA2Q9H2U2 334 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 CACYBPQ9HB71 228 aaKnown RBP6.2□□□□□ -1.42
UBR4-212ENST00000475973 BARX1Q9HBU1 254 aaPredicted RBP6.2□□□□□ -1.42
UBR4-212ENST00000475973 ADAP2Q9NPF8 381 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 TAS2R8Q9NYW2 309 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 FLVCR2Q9UPI3 526 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 ZNF337Q9Y3M9 751 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 SPEF1Q9Y4P9 236 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 IER3IP1Q9Y5U9 82 aa6.2□□□□□ -1.42
UBR4-212ENST00000475973 CNOT1A5YKK6 2376 aaKnown RBP6.2□□□□□ -1.42
UBR4-212ENST00000475973 A0A0A6YYH2 397 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 NPIPA5A0A0B4J1W7 369 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 LOC390937A0A1W2PQ73 354 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 SERINC4A6NH21 518 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ZNF860A6NHJ4 632 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 A6NJ64 397 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ACOD1A6NK06 481 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 NPIPA7E9PJI5 369 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 H3BUI4 141 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 MAGEB4O15481 346 aaPredicted RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 SUSD5O60279 629 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 SELENOFO60613 162 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 RASGRP1O95267 797 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 WDPCPO95876 746 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 HPP00738 406 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 CD74P04233 296 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ALDOBP05062 364 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 GYPBP06028 91 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 CD14P08571 375 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ZNF735P0CB33 412 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 NPIPA8P0DM63 369 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 CTSEP14091 401 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 PPP3CBP16298 524 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 IGFBP3P17936 291 aaPredicted RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 FSTP19883 344 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 PRKACBP22694 351 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 CDK2P24941 298 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 EDNRAP25101 427 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 MST1P26927 711 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 S100A11P31949 105 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 GABRA4P48169 554 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 MAP2K6P52564 334 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ART1P52961 327 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 UCNP55089 124 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 CLDN6P56747 220 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 SEC61A1P61619 476 aaKnown RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 GABREP78334 506 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ROM1Q03395 351 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 EGR4Q05215 589 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 CRYZQ08257 329 aaKnown RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 DBPQ10586 325 aaPredicted RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 STX4Q12846 297 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 BIKQ13323 160 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 FAM53BQ14153 422 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ZNF273Q14593 569 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ELOCQ15369 112 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 RBMS2Q15434 407 aaKnown RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 ZNF74Q16587 644 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 RNFT1Q5M7Z0 435 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 EEF1A1P5Q5VTE0 462 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 LIPNQ5VXI9 398 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 NKAIN2Q5VXU1 208 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 FAM198BQ6UWH4 519 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 APOOLQ6UXV4 268 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 PRSS41Q7RTY9 318 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 GKN2Q86XP6 184 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 STPG2Q8N412 459 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 LSM14AQ8ND56 463 aaKnown RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 ZNF248Q8NDW4 579 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 BVESQ8NE79 360 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 SDR9C7Q8NEX9 313 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 BEST4Q8NFU0 473 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 OR4K13Q8NH42 304 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ZNF417Q8TAU3 575 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 GPBAR1Q8TDU6 330 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 FCAMRQ8WWV6 532 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 PTX4Q96A99 478 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 NACC2Q96BF6 587 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 C4orf45Q96LM5 186 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ZFP3Q96NJ6 502 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 ALG12Q9BV10 488 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 CHRNA10Q9GZZ6 450 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 MKKSQ9NPJ1 570 aaPredicted RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 POT1Q9NUX5 634 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 SDHAF2Q9NX18 166 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 KLF2Q9Y5W3 355 aaPredicted RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 COL5A1P20908 1838 aaPredicted RBP6.19□□□□□ -1.42
UBR4-212ENST00000475973 LRP4O75096 1905 aa6.19□□□□□ -1.42
UBR4-212ENST00000475973 FREM2Q5SZK8 3169 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 MAP1BP46821 2468 aaKnown RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 A0A0J9YY10 115 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 TMEM272A0A1B0GTI8 110 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms