RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 GATAD2BQ8WXI9 593 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 ASB17Q8WXJ9 295 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 ROBO4Q8WZ75 1007 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 UFD1Q92890 307 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 TIMP4Q99727 224 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 CDADC1Q9BWV3 514 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 MRPL13Q9BYD1 178 aaKnown RBP10.88□□□□□ -0.67
MRPL55-227ENST00000475832 MARCH7Q9H992 704 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 TRIM36Q9NQ86 728 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 COA3Q9Y2R0 106 aaPredicted RBP10.88□□□□□ -0.67
MRPL55-227ENST00000475832 ZNF175Q9Y473 711 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 LIPGQ9Y5X9 500 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 CEPT1Q9Y6K0 416 aa10.88□□□□□ -0.67
MRPL55-227ENST00000475832 A0A1W2PQL4 384 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 OR14I1A6ND48 311 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 TVP23AA6NH52 213 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 SELENOFO60613 162 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 RAMP1O60894 148 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 MRPL33O75394 65 aaKnown RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 KRT33AO76009 404 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 HRGP04196 525 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 KRT8P05787 483 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 CTLA4P16410 223 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 RGS6P49758 472 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 ENTPD1P49961 510 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 GBX2P52951 348 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 ADAM8P78325 824 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 BDH1Q02338 343 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 RUNX1T1Q06455 604 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 ACSM1Q08AH1 577 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 TSTQ16762 297 aaKnown RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 SLC18B1Q6NT16 456 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 ZNF544Q6NX49 715 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 ZNF322Q6U7Q0 402 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 NHLRC1Q6VVB1 395 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 ANKRD13BQ86YJ7 626 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 SYS1Q8N2H4 156 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 RBMXL3Q8N7X1 1067 aaKnown RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 RNF128Q8TEB7 428 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 SPRYD4Q8WW59 207 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 NSMAFQ92636 917 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 TMEM45BQ96B21 275 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 WDYHV1Q96HA8 205 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 ZNF845Q96IR2 970 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 OR2M2Q96R28 347 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 OR5M11Q96RB7 305 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 TTYH2Q9BSA4 534 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 FUNDC2Q9BWH2 189 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 ULBP2Q9BZM5 246 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 PRDM14Q9GZV8 571 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 RNF122Q9H9V4 155 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 GP6Q9HCN6 339 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 BABAM2Q9NXR7 383 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 GLTPQ9NZD2 209 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 KCNG2Q9UJ96 466 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 TP53TG5Q9Y2B4 290 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 NOSIPQ9Y314 301 aaKnown RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 LSM2Q9Y333 95 aaKnown RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 FLVCR1Q9Y5Y0 555 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 C2CD3Q4AC94 2353 aa10.87□□□□□ -0.67
MRPL55-227ENST00000475832 PRRC2CQ9Y520 2896 aaKnown RBP10.87□□□□□ -0.67
MRPL55-227ENST00000475832 USP9YO00507 2555 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-227ENST00000475832 IGKV3D-15A0A087WSY6 115 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 A0A1W2PPL8 197 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 SLC22A20A6NK97 555 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 ZNF716A6NP11 495 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 HSPB2A8KAH6 182 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 ZNF724A8MTY0 619 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 J3QLW9 94 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 K7EM74 188 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 DCTN6O00399 190 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 ZNF593O00488 134 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-227ENST00000475832 PDGFAP04085 211 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 QDPRP09417 244 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 SPARCP09486 303 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 ZNF19P17023 458 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 KLK2P20151 261 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 PSMA1P25786 263 aaKnown RBP10.86□□□□□ -0.67
MRPL55-227ENST00000475832 LAP3P28838 519 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 SH3BGRP55822 239 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-227ENST00000475832 EGR3Q06889 387 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 HSPB2Q16082 182 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 KRTCAP3Q53RY4 240 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 OR2G6Q5TZ20 316 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 KCTD18Q6PI47 426 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-227ENST00000475832 CDC20BQ86Y33 519 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 TIGD4Q8IY51 512 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 OR2AJ1Q8NGZ0 328 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 THEM6Q8WUY1 208 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 TMEM54Q969K7 222 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 MCHR2Q969V1 340 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 ISOC1Q96CN7 298 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 YIPF6Q96EC8 236 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 ZNF385AQ96PM9 386 aaKnown RBP10.86□□□□□ -0.67
MRPL55-227ENST00000475832 RBM38Q9H0Z9 239 aaKnown RBP10.86□□□□□ -0.67
MRPL55-227ENST00000475832 SEC61A2Q9H9S3 476 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 GLRX2Q9NS18 164 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 SPRR3Q9UBC9 169 aa10.86□□□□□ -0.67
MRPL55-227ENST00000475832 ENPP5Q9UJA9 477 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms