RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 ZNF717Q9BY31 904 aaPredicted RBP0.59□□□□□ -2.31
HMGN1P10-201ENST00000474557 WDR76Q9H967 626 aa0.59□□□□□ -2.31
HMGN1P10-201ENST00000474557 ACTR8Q9H981 624 aa0.59□□□□□ -2.31
HMGN1P10-201ENST00000474557 GLRX2Q9NS18 164 aa0.59□□□□□ -2.31
HMGN1P10-201ENST00000474557 GPATCH2LQ9NWQ4 482 aa0.59□□□□□ -2.31
HMGN1P10-201ENST00000474557 KCNIP1Q9NZI2 227 aa0.59□□□□□ -2.31
HMGN1P10-201ENST00000474557 SEC14L3Q9UDX4 400 aa0.59□□□□□ -2.31
HMGN1P10-201ENST00000474557 FETUBQ9UGM5 382 aa0.59□□□□□ -2.31
HMGN1P10-201ENST00000474557 CDH9Q9ULB4 789 aa0.59□□□□□ -2.31
HMGN1P10-201ENST00000474557 FYCO1Q9BQS8 1478 aa0.59□□□□□ -2.32
HMGN1P10-201ENST00000474557 PLCH1Q4KWH8 1693 aa0.59□□□□□ -2.32
HMGN1P10-201ENST00000474557 PBRM1Q86U86 1689 aa0.59□□□□□ -2.32
HMGN1P10-201ENST00000474557 DCHS2Q6V1P9 2916 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 DMBT1Q9UGM3 2413 aaPredicted RBP0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 SACSQ9NZJ4 4579 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 MAP1AP78559 2803 aaPredicted RBP0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 NOS1P29475 1434 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 RRBP1Q9P2E9 1410 aaKnown RBP0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 ABCA5Q8WWZ7 1642 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 FAM230AA0A1W2PPH8 454 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 TMEM223A0PJW6 202 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 TRDCB7Z8K6 153 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 DNASE2O00115 360 aaPredicted RBP0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 SSX5O60225 188 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 MBD3O95983 291 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 OR56A5P0C7T3 313 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 IGHV1-8P0DP01 117 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 IGHV3-43DP0DP04 118 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 PGCP20142 388 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 TPSB2P20231 275 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 CMA1P23946 247 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 PSMA2P25787 234 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 GSSP48637 474 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 NCBP2P52298 156 aaKnown RBP eCLIP0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 NAPAP54920 295 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 PKNOX1P55347 436 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 PRKCDQ05655 676 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 LOXL1Q08397 574 aaPredicted RBP0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 TPSAB1Q15661 275 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 TP53I3Q53FA7 332 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 AFTPHQ6ULP2 937 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 DPY19L4Q7Z388 723 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 LRRC52Q8N7C0 313 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 NKAIN3Q8N8D7 197 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 OR4D9Q8NGE8 314 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 OR56B1Q8NGI3 324 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 OR10G4Q8NGN3 311 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 PHOSPHO2Q8TCD6 241 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 RTN4IP1Q8WWV3 396 aaPredicted RBP0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 ACOT11Q8WXI4 607 aaPredicted RBP0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 VPS35Q96QK1 796 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 CAPS2Q9BXY5 557 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 ECT2Q9H8V3 914 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 HMG20AQ9NP66 347 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 EXD2Q9NVH0 621 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 SIGLEC8Q9NYZ4 499 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 TBK1Q9UHD2 729 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 SIGLEC9Q9Y336 463 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 NCOA2Q15596 1464 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 MROH2AA6NES4 1674 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 UBE4BO95155 1302 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 PHLPP2Q6ZVD8 1323 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 PCDH11XQ9BZA7 1347 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 TICRRQ7Z2Z1 1910 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 CSPG4Q6UVK1 2322 aa0.58□□□□□ -2.32
HMGN1P10-201ENST00000474557 DNAH1Q9P2D7 4330 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 ACANP16112 2415 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 SONP18583 2426 aaKnown RBP0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 CLIP1P30622 1438 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 ADAMTS13Q76LX8 1427 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 RIMS2Q9UQ26 1411 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 DOCK8Q8NF50 2099 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 COL7A1Q02388 2944 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 COL4A1P02462 1669 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 ZNF831Q5JPB2 1677 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 ATP7BP35670 1465 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 FAM170AA1A519 330 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 VPS37CA5D8V6 355 aaPredicted RBP0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 SLC9B1P1A6NJY1 282 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 CHST1O43916 411 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 KERAO60938 352 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 GABARAPO95166 117 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 CLDN9O95484 217 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 CCNE2O96020 404 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 CCDC192P0DO97 292 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 CCL5P13501 91 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 COX5AP20674 150 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 HPCAL1P37235 193 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 CYB561P49447 251 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 SLC7A9P82251 487 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 FLI1Q01543 452 aaPredicted RBP0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 ACVR1Q04771 509 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 CBX3Q13185 183 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 ERCC8Q13216 396 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 PIGHQ14442 188 aaPredicted RBP0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 FAM78AQ5JUQ0 283 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 HSDL2Q6YN16 418 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 KDM7AQ6ZMT4 941 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 ZNF546Q86UE3 836 aa0.57□□□□□ -2.32
HMGN1P10-201ENST00000474557 ZNF664Q8N3J9 261 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms