RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 HDDC2Q7Z4H3 204 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 IGFN1Q86VF2 1251 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 RBM15BQ8NDT2 890 aaKnown RBP15.9■□□□□ 0.14
COL7A1-209ENST00000474432 ZNF519Q8TB69 540 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 YIPF5Q969M3 257 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 HOPXQ9BPY8 73 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-209ENST00000474432 MYLK2Q9H1R3 596 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 CHODLQ9H9P2 273 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 DUSP13Q9UII6 198 aa15.9■□□□□ 0.14
COL7A1-209ENST00000474432 TRAV27A0A087WT01 109 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 TGFAP01135 160 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 IFNA2P01563 188 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 IFNW1P05000 195 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 NAT2P11245 290 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 ZNF32P17041 273 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 UCP2P55851 309 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 RPL27P61353 136 aaKnown RBP15.89■□□□□ 0.13
COL7A1-209ENST00000474432 TOP3AQ13472 1001 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-209ENST00000474432 TRAM2Q15035 370 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 TAF11Q15544 211 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 IFI44LQ53G44 452 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 PABPC1L2AQ5JQF8 200 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 TMEM255AQ5JRV8 349 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 FAM120AOSQ5T036 256 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 RGS7BPQ6MZT1 257 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-209ENST00000474432 FOXL2NBQ6ZUU3 175 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 OR51A7Q8NH64 312 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 GEMIN6Q8WXD5 167 aaKnown RBP15.89■□□□□ 0.13
COL7A1-209ENST00000474432 LZICQ8WZA0 190 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 NSMAFQ92636 917 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 HSH2DQ96JZ2 352 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 SNX18Q96RF0 628 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 ALG12Q9BV10 488 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 SHARPINQ9H0F6 387 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 RACGAP1Q9H0H5 632 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 OR51B6Q9H340 312 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 C1orf198Q9H425 327 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 EFCAB1Q9HAE3 211 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 STX18Q9P2W9 335 aaKnown RBP15.89■□□□□ 0.13
COL7A1-209ENST00000474432 ABCD2Q9UBJ2 740 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 LPAR3Q9UBY5 353 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 KCNS2Q9ULS6 477 aa15.89■□□□□ 0.13
COL7A1-209ENST00000474432 LOC100509620A0A075B734 347 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 SLC22A23A1A5C7 686 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 CDC42EP2O14613 210 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 RP2O75695 350 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 ZNF682O95780 498 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 SERPINA1P01009 418 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 NCK1P16333 377 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 WNT5AP41221 380 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 CHN2P52757 468 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 CTXN1P60606 82 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 HSP90B2PQ58FF3 399 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 FAM27BQ5VT28 67 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 PHC2Q8IXK0 858 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 OR13C2Q8NGS9 318 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 ACOT11Q8WXI4 607 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-209ENST00000474432 HPS1Q92902 700 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 POM121L2Q96KW2 1035 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 FNDC11Q9BVV2 318 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 CDH20Q9HBT6 801 aa15.88■□□□□ 0.13
COL7A1-209ENST00000474432 WNT9BO14905 357 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 PHF1O43189 567 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-209ENST00000474432 SCG5P05408 212 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 LSP1P33241 339 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 MAGEB1P43366 347 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 PSG4Q00888 419 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 CD47Q08722 323 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 SGCAQ16586 387 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 TBC1D28Q2M2D7 210 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 ALKBH6Q3KRA9 238 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 TMPRSS11FQ6ZWK6 438 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 MBOAT2Q6ZWT7 520 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 ZNF101Q8IZC7 436 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 RNF113BQ8IZP6 322 aaKnown RBP15.87■□□□□ 0.13
COL7A1-209ENST00000474432 FAM156AQ8NDB6 213 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 AKR7LQ8NHP1 331 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 SYNPRQ8TBG9 265 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 GTF3AQ92664 365 aaKnown RBP15.87■□□□□ 0.13
COL7A1-209ENST00000474432 RDH5Q92781 318 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 WNT5BQ9H1J7 359 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 TAAR3PQ9P1P4 343 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 FBN3Q75N90 2809 aa15.87■□□□□ 0.13
COL7A1-209ENST00000474432 IQCMA0A1B0GVH7 501 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 A0A1W2PPW3 197 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 RNF212BA8MTL3 300 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 C17orf100A8MU93 164 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 EFCAB9A8MZ26 197 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 PTHP01270 115 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 SAGP10523 405 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-209ENST00000474432 LAP3P28838 519 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 THBS2P35442 1172 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 GPR4P46093 362 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 NUDT2P50583 147 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 CDH15P55291 814 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 PSME3P61289 254 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 PLP2Q04941 152 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 ENDOGQ14249 297 aaKnown RBP15.86■□□□□ 0.13
COL7A1-209ENST00000474432 ANKDD1AQ495B1 522 aa15.86■□□□□ 0.13
COL7A1-209ENST00000474432 THEM4Q5T1C6 240 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms