RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SPARTQ8N0X7 666 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TMEM123Q8N131 208 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF454Q8N9F8 522 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF511Q8NB15 262 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 OR6K3Q8NGY3 331 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 HAVCR2Q8TDQ0 301 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 THEM6Q8WUY1 208 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 NANOS1Q8WY41 292 aaKnown RBP9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 CNTNAP3BQ96NU0 1288 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 FOXN4Q96NZ1 517 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 RHNO1Q9BSD3 238 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 ALG8Q9BVK2 526 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 CDCA4Q9BXL8 241 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 CNTNAP3Q9BZ76 1288 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 LINC00470Q9BZP3 86 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 ADGRL4Q9HBW9 690 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 CRLF2Q9HC73 371 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 FKBP14Q9NWM8 211 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 PAK1IP1Q9NWT1 392 aaPredicted RBP9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 PROCRQ9UNN8 238 aa9.1□□□□□ -0.95
PRPF38A-202ENST00000474048 TRGV8A0A0C4DH27 118 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 TMEM129A0AVI4 362 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 MBD3L4A6NDZ8 208 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 MBD3L3A6NE82 208 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 MBD3L5A6NJ08 208 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF99A8MXY4 864 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF593O00488 134 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 ZNF432O94892 652 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 IGHV3-9P01782 118 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 IGHA1P01876 353 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 MT-ND5P03915 603 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 SMIM18P0DKX4 95 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 C21orf33P30042 268 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 GBX2P52951 348 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 TAS2R43P59537 309 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 PCBD1P61457 104 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 FAPQ12884 760 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 BLMHQ13867 455 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 CEACAM16Q2WEN9 425 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 PRR30Q53SZ7 412 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 C10orf128Q5T292 105 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 KLHL24Q6TFL4 600 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 PLXDC2Q6UX71 529 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 DPY19L4Q7Z388 723 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 KRT77Q7Z794 578 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 LHFPL3Q86UP9 236 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 ZIC4Q8N9L1 334 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 ST6GALNAC3Q8NDV1 305 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 MBD3L2Q8NHZ7 208 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 KISS1RQ969F8 398 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 DDOQ99489 341 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 FOXB1Q99853 325 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 ACOT13Q9NPJ3 140 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 TRIM36Q9NQ86 728 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 ERVK13-1Q9NX77 482 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 GALNT8Q9NY28 637 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 GNG8Q9UK08 70 aa9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 CAB39Q9Y376 341 aaPredicted RBP9.09□□□□□ -0.95
PRPF38A-202ENST00000474048 CIB4A0PJX0 185 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 HSPB2A8KAH6 182 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 J3QLW9 94 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 DCTN6O00399 190 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNHIT1O43257 154 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 UPK3AO75631 287 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 OR8G3PP0DMU2 310 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF19P17023 458 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 HSD11B1P28845 292 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 TIMP3P35625 211 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 MAP2K4P45985 399 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 OR3A2P47893 321 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 ETV1P50549 477 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 EMX1Q04741 257 aaPredicted RBP9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 MRPL28Q13084 256 aaKnown RBP9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 AQP6Q13520 282 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 GALEQ14376 348 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 SPHARQ15513 63 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 STK11Q15831 433 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 HSPB2Q16082 182 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 ETFDHQ16134 617 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 HIST3H3Q16695 136 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 TIGD6Q17RP2 521 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 TSPO2Q5TGU0 170 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 RNLSQ5VYX0 342 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 FBXW9Q5XUX1 488 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 SLC25A47Q6Q0C1 308 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF322Q6U7Q0 402 aaPredicted RBP9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF813Q6ZN06 617 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 SLC16A14Q7RTX9 510 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 KCTD20Q7Z5Y7 419 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 FGD2Q7Z6J4 655 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 ADGRE4PQ86SQ3 457 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 ATCAYQ86WG3 371 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 YIPF7Q8N8F6 280 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 C9orf106Q8NAJ2 232 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 SLC26A10Q8NG04 563 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 OR52N1Q8NH53 320 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 OTOSQ8NHW6 89 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 C11orf40Q8WZ69 217 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 SGCDQ92629 289 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms